Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq130 96.9 3e-15 >seq130 Length=374773 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || || ||||| || || || | ||| | ||| || | ||||| ||| Sbjct 265106 GTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTGCCATCTTCCAATTGTTTACCA 265047 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | |||||| ||||| ||||| || ||||||||||| ||| || ||| Sbjct 265046 GCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTTAGCTTTG 264987 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | || || | | ||||||||| | || | || ||||| || || ||| Sbjct 264986 ACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTAATGGTCTTGCCTGTTAGTGTT 264927 Query 118722 TTTACAAAAATCTGCATGGCTTA 118744 |||||||| |||||||| |||| Sbjct 264926 TTTACAAAGATCTGCATTTCTTA 264904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829633340340