Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq130 82.4 5e-11 >seq130 Length=374773 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 || ||||| || || ||||| ||| ||| ||||| || || ||||| || || | | Sbjct 265127 AGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTG 265068 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || ||||| || || || || || || | ||||| || || || | | |||| Sbjct 265067 CCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCC 265008 Query 34292 TTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||||| ||||| ||||| | || | || | ||| | | ||||| |||| || Sbjct 265007 TTGTCCTGAATCTTA-GCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGT 264949 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || || ||||| |||||||||||||| Sbjct 264948 AATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCAT 264910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071429071200