Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq130 98.7 8e-16 >seq130 Length=374773 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| ||||| | || | || ||||| || ||||| || ||||| | | ||| | Sbjct 265127 AGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTG 265068 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||||||||||||| || ||| |||| | | |||||||| || | || ||| Sbjct 265067 CCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCC 265008 Query 18228 TTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286 || || ||| | | |||| ||| | | ||| ||| ||| ||||||| || | || Sbjct 265007 TTGTCCTGAATCT-TAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGT 264949 Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTT 18327 ||| | ||||| || | |||||||||||| || ||||||| Sbjct 264948 AATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCATTT 264908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343329628025