Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq120 82.4 6e-11 >seq120 Length=60016 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || |||||||| || | || || ||||| || || | || || ||| | Sbjct 31410 ATGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGAACCATCA 31469 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| |||||| | ||||||| | || ||||| | || ||| || Sbjct 31470 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31529 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||||||||||| ||| || |||||| |||||||| ||| | ||||| | Sbjct 31530 CAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31589 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACG 25046 || |||||||| | || | |||||||| ||||| Sbjct 31590 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACG 31624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418303260778400