Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq130 91.5 1e-13 >seq130 Length=374773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||| || || ||||| ||||| || | || || ||||| | ||||||||| Sbjct 265106 GTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTGCCATCTTCCAATTGTTTACCA 265047 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| |||||| ||| || ||||| ||||| || || || ||||| ||| | || | ||| Sbjct 265046 GCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTGTC-CTGAATCTTAGCTTT 264988 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | ||| | || || | |||||| ||||| | || | |||||||| || | || Sbjct 264987 GACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTAATGGTCTTGCCTGTTAGTGT 264928 Query 139747 TTTTACGAATATTTGCATAGCTTA 139770 |||||| || || ||||| |||| Sbjct 264927 TTTTACAAAGATCTGCATTTCTTA 264904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063100884000