Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq117 176 7e-40 >seq117 Length=74688 Score = 176 bits (194), Expect = 7e-40 Identities = 195/260 (75%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||| |||||||||| | |||||| ||||||||||||||||| || || ||||||||| Sbjct 36703 GCTAAACGTCATCGCAAAGTTCTTCGTGATAACATCCAAGGAATTACAAAACCAGCTATC 36762 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || ||| | ||||| || || ||| | |||| || | |||||||| || Sbjct 36763 CGTCGTCTCGCACGTAGAGGTGGTGTAAAACGTATTTCTGCCTTAATTTATGAAGAAGTT 36822 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| |||| | | || ||||| | |||||| | ||||||||| Sbjct 36823 CGTGGTGTATTGAAAGCCTTCTTAGAAACTGTTATAAAGGATGCTGTAACCTATACCGAA 36882 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 | || | ||| ||||| ||||| | |||||| | || ||||||||||| | || ||| Sbjct 36883 TATGCCAGACGCAAGACCGTCACGGCAATGGATGTAGTTCATGCATTGAAAAGACAGGGC 36942 Query 16673 CGTAAGATTTATGGTTTTGG 16692 | | ||||||||||| Sbjct 36943 AAAACTTTATATGGTTTTGG 36962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075067425485