Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq130 98.7 1e-15 seq120 84.2 2e-11 >seq130 Length=374773 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 ||||||| | |||||||||||| |||| || || | || || | || | || | Sbjct 264908 AAATGCAGATCTTTGTAAAAACACTAACAGGCAAGACCATTACTTTGGAGGTCGAGCCCT 264967 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 || || || || | |||||| |||||| ||||| || || || ||||| |||| Sbjct 264968 CTGATACTATTGAAAATGTCAAAGCTAAGATTCAGGACAAGGAGGGAATTCCTCCTGATC 265027 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 |||| | | || | | || |||||| | ||||||| |||| | ||||||| Sbjct 265028 AACAGCGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACTCTTTCGGACTATA 265087 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | ||||| || |||||||| | ||||| || |||||||||||||| || Sbjct 265088 ATATTCAGAAGGAATCTACCTTACATCTAGTACTGAGACTTAGAGGTGG 265136 >seq120 Length=60016 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || ||| | || || ||| | ||||| | || | ||| || Sbjct 31410 ATGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGAACCATCA 31469 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| ||| || || ||||| || ||||| |||||| Sbjct 31470 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31529 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | || | | || |||||| | ||||||| | | | | | | | || ||||| Sbjct 31530 CAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTA-CTTTATCTGATTATAA 31588 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||||| | ||| | || | | |||||||| || Sbjct 31589 TATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGG 31636 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || ||||| | || || | ||| ||||| || Sbjct 31638 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31697 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| ||| || || ||||| || ||||| |||||| Sbjct 31698 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31757 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | || | | || |||||| | ||||||| | | | | | | | || ||||| Sbjct 31758 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTA-CTTTATCTGATTATAA 31816 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||||| | ||| | || | | |||||||| || Sbjct 31817 TATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGG 31864 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || ||||| | || || | ||| ||||| || Sbjct 31866 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31925 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| ||| || || ||||| || ||||| |||||| Sbjct 31926 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31985 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | || | | || |||||| | ||||||| | | | | | | | || ||||| Sbjct 31986 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTA-CTTTATCTGATTATAA 32044 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||||| | ||| | || | | |||||||| || Sbjct 32045 TATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGG 32092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661532424400