Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq120 93.3 4e-14 >seq120 Length=60016 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 ||||| |||||||||||||| || || || || || ||||| || || | || ||| Sbjct 31403 ATTAAGGATGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGA 31462 Query 115339 GTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| | || || ||| | | || ||| ||||||| ||||| ||||| | || Sbjct 31463 -ACCATCAGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTC 31521 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||| ||| | | || | ||| || |||||||| ||||||| || | | | Sbjct 31522 CTGATCAACAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTACTTTATCTG 31581 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||||| ||||| ||||| |||||| ||||| | || || Sbjct 31582 ATTATAATATTCAGAAAGAATCTACTTTACATTTAGTTTT 31621 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || ||||| || ||||| | ||| || ||| | Sbjct 31638 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGA-ACCATC 31696 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| ||||| ||||| | || |||||| Sbjct 31697 AGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCA 31756 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | || | ||| || |||||||| ||||||| || | | |||||||| Sbjct 31757 ACAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAA 31816 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||| ||||| |||||| ||||| | || || Sbjct 31817 TATTCAGAAAGAATCTACTTTACATTTAGTTTT 31849 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || ||||| || ||||| | ||| || ||| | Sbjct 31866 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGA-ACCATC 31924 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| ||||| ||||| | || |||||| Sbjct 31925 AGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCA 31984 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | || | ||| || |||||||| ||||||| || | | |||||||| Sbjct 31985 ACAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAA 32044 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||| ||||| |||||| ||||| | || || Sbjct 32045 TATTCAGAAAGAATCTACTTTACATTTAGTTTT 32077 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || ||||| || ||||| | ||| || ||| | Sbjct 32094 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGA-ACCATC 32152 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| ||||| ||||| | || |||||| Sbjct 32153 AGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCA 32212 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | || | ||| || |||||||| ||||||| || | | |||||||| Sbjct 32213 ACAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAA 32272 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| ||||| || ||| ||||| |||| Sbjct 32273 TATTCAGAAAGAATCCACTTTACATTTGGT 32302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343248337400