Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq130 91.5 1e-13 >seq130 Length=374773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/245 (69%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 16702 CATTTAC-CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGT 16760 || |||| || |||| || |||||||| | ||| | || || ||||| || || || | Sbjct 265144 CAATTACACCACCTCTAAGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTAT 265085 Query 16761 AGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGT 16820 |||| | | ||| || | || ||||||||||| || ||| | || | |||||||| | Sbjct 265084 AGTCCGAAAGAGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGAT 265025 Query 16821 CCACAGGCACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878 | ||| | ||||| ||||| || || ||| || || | | | ||| || Sbjct 265024 CAGGAGGAATTCCCTCCTTGTCCTGAATCTTAGCT--TTGACATTTTCAATAGTATCAGA 264967 Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 |||||| |||| || ||||| || || || || ||||| ||||| |||||||||| Sbjct 264966 GGGCTCGACCTCCAAAGTAATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCATTTC 264907 Query 16939 GTAGC 16943 |||| Sbjct 264906 TTAGC 264902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087284133550