Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq130 129 5e-25 seq120 123 2e-23 >seq130 Length=374773 Score = 129 bits (142), Expect = 5e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||||| |||| ||||| |||||||| || ||||| || || || | ||| | Sbjct 265127 AGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTG 265068 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| | |||||||||||| |||| | ||||||||| || |||||||| || || Sbjct 265067 CCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCC 265008 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| ||| | | ||||| || || | || ||||| |||| || Sbjct 265007 TTGTCCTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTA 264948 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 114388 | || ||||| || || ||||||||||| |||||||| |||| Sbjct 264947 ATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCATTTCTTA 264904 >seq120 Length=60016 Score = 123 bits (136), Expect = 2e-23 Identities = 173/239 (72%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||||||||||||| ||||||||||| ||||| || ||||| Sbjct 31639 ATACCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCA 31580 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | |||||| || || | || | ||| ||||| || ||| Sbjct 31579 GATAAAGTACGACCATCTTCCAATTGTTTCCCTGCAAATATTAAACGTTGTTGATCAGGA 31520 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| || || ||| ||||| |||| | | ||||| || || | | ||| Sbjct 31519 GGAATACCTTCCTTATCTTGAAT-TTTTGCTTTAACATTTTCAATTGTATCTGATGGTTC 31461 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAAT 114390 || || | || | ||||| || || || || || |||||||| ||||| |||||| Sbjct 31460 CACCTCTAATGTGATAGTTTTCCCTGTAAGTGTCTTAACAAAAATTTGCAT-CCTTAAT 31403 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||||||||||||| ||||||||||| ||||| || ||||| Sbjct 31867 ATACCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCA 31808 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | |||||| || || | || | ||| ||||| || ||| Sbjct 31807 GATAAAGTACGACCATCTTCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGA 31748 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| || || ||| ||||| |||| | | ||||| || || | | ||| Sbjct 31747 GGAATACCTTCCTTATCTTGAAT-TTTTGCTTTAACATTTTCAATTGTATCTGATGGTTC 31689 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || ||||| || |||||||| ||||| Sbjct 31688 TACTTCTAATGTAATAGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31638 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||||||||||||| ||||||||||| ||||| || ||||| Sbjct 32095 ATACCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCA 32036 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | |||||| || || | || | ||| ||||| || ||| Sbjct 32035 GATAAAGTACGACCATCTTCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGA 31976 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||| || || ||| ||||| |||| | | ||||| || || | | ||| Sbjct 31975 GGAATACCTTCCTTATCTTGAAT-TTTTGCTTTAACATTTTCAATTGTATCTGATGGTTC 31917 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || ||||| || |||||||| ||||| Sbjct 31916 TACTTCTAATGTAATAGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133657543740