Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq120 104 2e-17 seq130 89.7 5e-13 >seq120 Length=60016 Score = 104 bits (114), Expect = 2e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| ||||||||||||| | || || || ||||| || || || Sbjct 31636 CCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGAT 31577 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | |||||| || | | | |||| ||| ||||| || ||||| Sbjct 31576 AAAGTACGACCATCTTCCAATTGTTTCCCTGCAAATATTAAACGTTGTTGATCAGGAGGA 31517 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| |||||| ||||| | ||| | || || | | ||||| Sbjct 31516 ATACCTTCCTTATC-TTGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCCAC 31458 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTATAATAT 138626 ||| | || | ||||| || || || || || |||||||| ||||| | |||| || Sbjct 31457 CTCTAATGTGATAGTTTTCCCTGTAAGTGTCTTAACAAAAATTTGCATCCTTAATAAAAT 31398 Query 138627 TATT 138630 |||| Sbjct 31397 TATT 31394 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| ||||||||||||| | || || || ||||| || || || Sbjct 31864 CCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGAT 31805 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | |||||| || | | | |||| ||| ||||| || ||||| Sbjct 31804 AAAGTACGACCATCTTCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGA 31745 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| |||||| ||||| | ||| | || || | | || || Sbjct 31744 ATACCTTCCTTATC-TTGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTAC 31686 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || |||||||| ||||| Sbjct 31685 TTCTAATGTAATAGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31638 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| ||||||||||||| | || || || ||||| || || || Sbjct 32092 CCACCTCTAAGACGTAAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGAT 32033 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | |||||| || | | | |||| ||| ||||| || ||||| Sbjct 32032 AAAGTACGACCATCTTCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGA 31973 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| |||||| ||||| | ||| | || || | | || || Sbjct 31972 ATACCTTCCTTATC-TTGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTAC 31914 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || |||||||| ||||| Sbjct 31913 TTCTAATGTAATAGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31866 >seq130 Length=374773 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTC 138464 |||| ||||| | | || ||||| ||||| || ||||| | ||| | || | || || Sbjct 265118 ACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTGCCA-TCTTC 265060 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | |||| | ||||||||| || ||||| || || || ||||| | Sbjct 265059 CAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTGTCC-T 265001 Query 138525 GATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | ||| | | ||| | || || | | ||| ||||| | || | || | Sbjct 265000 GAATCTTAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTAATGGTCT 264941 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 138620 | || || || ||||||||||| |||||||| |||| Sbjct 264940 TGCCTGTTAGTGTTTTTACAAAGATCTGCATTTCTTA 264904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261500524400