Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq130 95.1 1e-14 >seq130 Length=374773 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | | || || || | ||||| ||||| || || |||||||| || || Sbjct 265136 CCACCTCTAAGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAA 265077 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | ||||| ||||| ||||||| ||||| ||||| ||||| Sbjct 265076 AGAGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 265017 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| | | || |||| | ||| | || || | |||||| Sbjct 265016 ATTCCCTCCTTGTCC-TGAATCTTAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGAC 264958 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 127119 || | || | || ||||| || || ||||||||||| |||||||| |||| Sbjct 264957 CTCCAAAGTAATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCATTTCTTA 264904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499938154800