Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq120 122 8e-23 seq130 114 1e-20 >seq120 Length=60016 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||| | || ||||| || || ||||||||||| | || | ||| Sbjct 31849 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 31790 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||||||||||||||| |||| || ||||| || || || ||||| ||||| |||||| Sbjct 31789 TCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31730 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || || || | || ||||| | |||| || Sbjct 31729 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTC 31670 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| || |||||||||||||| Sbjct 31669 TTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31638 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||| | || ||||| || || ||||||||||| | || | ||| Sbjct 32077 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 32018 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||||||||||||||| |||| || ||||| || || || ||||| ||||| |||||| Sbjct 32017 TCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31958 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || || || | || ||||| | |||| || Sbjct 31957 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTC 31898 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| || |||||||||||||| Sbjct 31897 TTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31866 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || ||||| || || ||||||||||| | || | ||| ||||||||||||||| Sbjct 32290 GTGGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCCAATTGTTTTCCT 32231 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 || |||| || ||||| || || || ||||| ||||| ||||||||||||||| ||| Sbjct 32230 GCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTTGCTTTA 32171 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | ||| | || || || | || ||||| | |||| || || || || ||||| Sbjct 32170 ACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTCTTTCCTGTAAGAGTC 32111 Query 45324 TTTACAAAAATTTGCAT 45340 || |||||||||||||| Sbjct 32110 TTAACAAAAATTTGCAT 32094 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||| | || ||||| || || ||||||||||| | || | ||| Sbjct 31621 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 31562 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||||||||| ||||| |||| || ||||| || || || ||||| ||||| |||||| Sbjct 31561 TCCAATTGTTTCCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31502 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || || || | || || || | || | ||| Sbjct 31501 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCCACCTCTAATGTGATAGTT 31442 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || || ||||||||||||||| Sbjct 31441 TTCCCTGTAAGTGTCTTAACAAAAATTTGCATC 31409 >seq130 Length=374773 Score = 114 bits (126), Expect = 1e-20 Identities = 171/241 (71%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || |||| |||||||| | || |||||||| || |||||||| || | ||| | Sbjct 265127 AGTCTCAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTG 265068 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| ||||||||||| || || | ||||| || || || || || ||||| || || Sbjct 265067 CCATCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCC 265008 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || || ||||| || ||||| ||| | || || || | |||||| || | |||| Sbjct 265007 TTGTCCTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTA 264948 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC---GCGACCAATTTAATAA 45359 | || ||||| ||||| ||||||||||| || ||||| | |||| ||||||| || Sbjct 264947 ATGGTCTTGCCTGTTAGTGTTTTTACAAAGATCTGCATTTCTTAGCGA--AATTTAAGAA 264890 Query 45360 T 45360 | Sbjct 264889 T 264889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002380744200