Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq129 93.3 5e-14 >seq129 Length=387383 Score = 93.3 bits (102), Expect = 5e-14 Identities = 188/277 (68%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389 |||| |||| | |||| | ||| | || ||||||||||| | ||| | ||||| || Sbjct 182297 TATCAATAATCTTATTCAAGTTTCTAGTTACAACCTTTGTTACTTCCTTGAGCTTGTCAA 182356 Query 116390 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449 |||||||| | |||||| || ||| |||| ||||| | || || |||| || | Sbjct 182357 AATCAAAAGTTTTTTTCTCTTTATCAACAAACTTGGGAAGTCCAATGGATGCCAAGTTGC 182416 Query 116450 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 116509 | |||| | |||| ||| ||||||||||| || ||||| | || | Sbjct 182417 AGACAGCAATTTCATTTGCGCTAGTATACTCTATAATCTCTGTACAGAGGTTACTAGAAA 182476 Query 116510 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT--GTTACACGCATCCTTGTAGAGCAT 116567 ||||||||| || || || ||||| ||||| | ||| || ||||||||| || Sbjct 182477 CAATGGTGCCTAAATTTTTCTGATT--ACTTTTTTGATTAGCGGCGTCCTTGTAGCAAAT 182534 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 ||| || |||||||| || |||| | | ||| ||| Sbjct 182535 ATAGGGAGTCCCCGTTTCTATTTGAGCTTGGAGTATA 182571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506088018200