Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq112 720 0.0 seq89 453 9e-122 seq145 154 1e-31 seq141 127 2e-23 seq123 125 5e-23 seq108 104 2e-16 seq143 93.3 3e-13 seq130 91.5 1e-12 >seq112 Length=84128 Score = 720 bits (798), Expect = 0.0 Identities = 1112/1568 (71%), Gaps = 28/1568 (2%) Strand=Plus/Plus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | |||| ||| || | || || ||||||||| Sbjct 81434 AGCATCATTAACCATACGTTCAATATCTTCTTTAGATAAACGACCCTTATCATTAGTAAT 81493 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||||| || || || || |||||| | |||| ||||| | ||||||||| Sbjct 81494 GGTAATTTTACTGCTCTTACCAGTACTCTTATCAACAGCAGAAACATTTAAAATACCATT 81553 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | ||||||||| || ||||||||||| || ||||| | || ||||| || || Sbjct 81554 AGCATCAATATCAAATGTTACCTCAATTTGAGGAACACCTCTAGGTGCTGGTGGAATACC 81613 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || |||| ||| |||| | || ||||||||| || | || ||||| || | Sbjct 81614 ATCTAAATGGAATTTTCCTAATAAATGATTATCTTTTGTCATAGCACGCTCACCTTCATA 81673 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 517461 || ||| || || || |||||||||||| ||| |||||||||||| | ||| || Sbjct 81674 AACTTGAATTAATACACCACTTTGATTATCTGCATATGTTGTAAATACTTGTGTTTTCTT 81733 Query 517462 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 ||||| || || || | ||||| | || ||||||| ||||||||| |||||||| Sbjct 81734 TGCTGGAATAGTAGTATTACGTTCAATTAATTTTGTCATAACACCACCTGCAGTTTCTAA 81793 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGT-TT 517580 |||||| || | |||| ||||| | || | | || || | | || | | || Sbjct 81794 ACCAAGTGATAATGGAGCAACATCTAATAATAATAAATCCTGTACAGCTG-ATGATTGTT 81852 Query 517581 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 517640 ||| | |||||||||||| | ||||||||||||||||||||| ||||||||||||| Sbjct 81853 CTCCATTTAAAATAGCTGCTTGTACAGCAGCACCATATGCAACAGCCTCATCAGGATTAA 81912 Query 517641 CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGA-AG-TTGTCTTACCTTAG 517697 | || | | ||| ||||||||| || || | ||| | || || ||| || || | Sbjct 81913 TTGCTTTACATGGTTCTTTACCATTAAAGAATTCTTGTATGAGAGCTTGA---ACTTTTG 81969 Query 517698 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 517757 ||||||| | ||| || |||||||| |||| ||||| || | |||||||| | | Sbjct 81970 GAATACGTGTTGAACCACCAACTAAAACAACATCATGTACAGATCTTTTATCCATACTAG 82029 Query 517758 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTT 517817 |||| ||| |||||||| || || | | || | || | || | |||||||| Sbjct 82030 CATCCTTTAATACTTTTTCTACTGGAGCTAATGTTGCACGGAAATAATCAGCACAAAGTT 82089 Query 517818 CTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAA 517877 |||| ||| | || | | ||| | ||| ||||||||| ||||| |||| ||||| | Sbjct 82090 CTTCAAATCTTGCACGACTAATTGCAACAGAATAATCAATGCCTTCATACAATGAATCTA 82149 Query 517878 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 517937 ||||| || | |||||| |||||||||| || | |||||||||||||||| || | Sbjct 82150 ATTCAACTGTTGCTTGAGTTGAAGAAGATAATGTTCTTTTAGCACGTTCACATTGAGTTC 82209 Query 517938 TTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTTAT-ATT--TTCTCTTG 517993 | ||||||| ||| || || | | | || ||||| | | ||| |||| || Sbjct 82210 TAAGTCTTCTTAAAGCACGAGCATTAGTTGTT-AAATCCATACCACGATTCTTTCTTTTA 82268 Query 517994 AAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTA 518053 ||||||| ||||| || || | | |||||||||||||||||| || || | ||| Sbjct 82269 AAATCTTGTACACAAAATTCAACTAATCTATTATCAAAATCTTCACCACCTAAATGTGTA 82328 Query 518054 TTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCA 518113 | |||| || ||| |||||| |||| |||||||||| || || | | ||||||| Sbjct 82329 TCACCTGCTGTGGCTTTTACTTCAAAAATACCATCTTCAATAGTTAATAATGATACATCA 82388 Query 518114 TGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG----TTTTT 518169 || |||||||| | |||||||||||| ||||| ||||| | | || || Sbjct 82389 AATGTACCACCACCTAAATCAAAAATAAGAACATT----TCTTTCACCAGTACCCTTCTT 82444 Query 518170 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 518229 |||||||||||| |||| ||| || || ||||||||||||||||| | || |||||| | Sbjct 82445 ATCAAGACCATATGCAATAGCTGCTGCTGTTGGTTCATTAATAATACGCATAACATTTAA 82504 Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 |||||||||| || |||||||| || ||||| | ||| ||||| |||||||||||||| Sbjct 82505 ACCAGCAATTGCACCAGCATCTTTTGTTGCTTGACGTTGAGAATCATTAAAATATGCAGG 82564 Query 518290 AACAGTAATAACGGCATCAGTTACTTCT-TTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 || |||| || |||| ||| || | ||| | |||||| || | | |||| Sbjct 82565 TACTGTAACTACTGCAT-TCTTAATTGTACGACCTAAATAAGCTTCTGATATCTCCTTCA 82623 Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGAT 518408 | || ||||| ||||| ||||||| ||||| | ||| || ||| | || Sbjct 82624 TCTTTTGTAAAACCATTGCAGAAATTTCTTCTGCATGAAATTCTTTTTTCTCACCTAAAT 82683 Query 518409 ATGATACTTCAAAATA-TGGTTTA---TTACCAACATTAATAACTTTAAATGGCCAGTAT 518464 | ||| | || || ||||||| || | | ||| ||||||||||||||| | Sbjct 82684 AACTTAC-ACTAATTATTGGTTTATCTTTTGGACCTCTAACAACTTTAAATGGCCAATGA 82742 Query 518465 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 518524 ||||||| ||| || ||| |||| || | ||||||||| || |||||||||||| Sbjct 82743 GTCATATCACTTTGTACTGCTTGATCATCGAATTTTCTACCAATCAAACGTTTTGCATCA 82802 Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 || | ||| || ||||||| ||| | |||| || |||||||| ||||| | | || Sbjct 82803 AATACAGTGTTTTCTGGATTACGAGCAACCTGATTCTTAGCTGCATCACCAATTAAACGT 82862 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 || | || ||||||| ||||||||||||||| || ||||||||||||||||| | |||| Sbjct 82863 TCACTGTCAGTAAATGCAACATATGATGGAGTAGTACGATTACCTTGATCATTTGGAATA 82922 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 518704 || || ||| || ||||| |||||||||||| || | ||||| || ||||||||| Sbjct 82923 ATATCTACTGTATCATTTCTCCATACACCTACGCATGAGTATGTTGTACCCAAATCAATA 82982 Query 518705 CCAATAGC 518712 |||||||| Sbjct 82983 CCAATAGC 82990 Score = 125 bits (138), Expect = 5e-23 Identities = 207/299 (69%), Gaps = 15/299 (5%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 ||||||||||| || || |||||||||| ||| || ||| | | ||| | ||| Sbjct 82302 TCAAAATCTTCACCACCTAAATGTGTATCACCTGCTGTGGCTTTTACTTCAAAAATACCA 82361 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 | | ||| | | ||| || ||||| || || ||| | ||||| ||| ||| || || Sbjct 82362 TCTTCAATAGTTAATAATGATACATCAAATGTACCACCACCTAAATCAAAAATAAGAACA 82421 Query 322205 TTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 322261 || | ||||||| || || ||| | ||| ||||||| ||||||| Sbjct 82422 TTTCTTTCACCAGTACCCTTCTTA------TCA------AGACCATATGCAATAGCTGCT 82469 Query 322262 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 322321 || |||||||||||||| || | ||||| |||||| |||||| | ||| ||| Sbjct 82470 GCTGTTGGTTCATTAATAATACGCATAACATTTAAACCAGCAATTGCACCAGCATCTTTT 82529 Query 322322 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | || | |||||||||||||| ||||| |||| ||||| || ||||| Sbjct 82530 GTTGCTTGACGTTGAGAATCATTAAAATATGCAGGTACTGTAACTACTGCATTCTTAAT 82588 >seq89 Length=60508 Score = 453 bits (502), Expect = 9e-122 Identities = 1059/1584 (67%), Gaps = 39/1584 (2%) Strand=Plus/Minus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 |||||| ||||| |||||| || ||||| ||||||| | ||||| | |||| ||| Sbjct 51404 TTATCTTCTTCTGCAAATTGTTCTGCTTCCTTAATCATACGTTCAATATCTTCTTGAGAA 51345 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | |||||| || ||| ||||||||||| || | ||||| || |||||| Sbjct 51344 AGTCTTCCTTTATCATTTGTAATAGTAATCTTTTCAGATTTACCAGTACCTTTATCTTTA 51285 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | |||||||| ||||| ||||||||||| Sbjct 51284 GCACTTACTTGTAAAATACCATCAGTATCAATTTCAAATGTAACTTCTATTTGAGGGACA 51225 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| ||||||| || || || | | |||| | || ||| ||||||||| ||| Sbjct 51224 CCTCTTGGAGCAGGAGGTATTCCAGTAAGTTCAAATTTACCAAGAAGATTATTATCCTTA 51165 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | |||||||| || |||| ||| || || | | |||||||||| ||| Sbjct 51164 GTCATTGGACGTTCACCTTCAAAAACTTGTATCAATACAGCGGGTTGATTATCTTGATAT 51105 Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498 || |||| ||| | ||||||| ||||| || || | | ||||| || ||| Sbjct 51104 GTACTAAAGACTTGGCTTTTTTTAGTAGGAACAACAGTATTACGAGAAATAAGTTTAGTC 51045 Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558 |||| |||||| | || || | ||| | | | |||||| ||||| | || ||| Sbjct 51044 ATAACACCACCAACAGTCTCAATACCCAATGTTAAAGGAGTAACATCCAATA-----ATA 50990 Query 517559 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618 | || | | | || ||| | | ||| ||||||||| |||||||||||| Sbjct 50989 AT----AGATCACTACCTCCTTCGCCAGCTAATATACCTGCTTGAACTGCAGCACCATAT 50934 Query 517619 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 517678 |||||||||||||||||||||| | |||| ||| ||||||| ||| || | | | Sbjct 50933 GCAACAGCTTCATCAGGATTAATACCACGATTTGGTTCCTTACCATCGAAGAATTCTTTA 50874 Query 517679 AG--AAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 | ||| ||| || ||||| ||||| | || || |||||||| |||||||||| Sbjct 50873 ATTAAAGATTGAATT---TTAGGGATACGTGTAGAACCACCAACTAAAACAATTTCATCA 50817 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795 || | ||||| | | || ||| ||||||||| | || || || | | Sbjct 50816 ACATCAGATTTTTTGATACCTGCATCATCTAAAACTTTCTGTACAGGATCTATTGTTTTT 50757 Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 517855 || || || || | | | ||| || ||||||||||| |||||||| || | ||| Sbjct 50756 CTGAATAAATCAGCATTTAATTCATCAAATTTAGCTCTTGTAAGAGTTTCACTTAGATCT 50697 Query 517856 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 517915 | ||||| | ||| |||| |||||| || ||| | ||| |||| || | | Sbjct 50696 ACACCTTCCATTAAACCTTCAATTTCAATTTTAACTTGTGGAACAGATGATAACGCTCTT 50637 Query 517916 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT--TTTG-CTGATTGATTCAAA 517972 || | || | || | || ||| || |||| ||| |||| | |||| | | | Sbjct 50636 TTTGATTTCTCTACTTCTCTTCTAAGTTTTTGTAACGCTCTTTTGTCAGATT---TTATA 50580 Query 517973 TCTGTTTTATATTTTCTCTTGA-AATCTTCAACACACCATGTTACA--AGACGATTATCA 518029 ||| | | ||| |||| |||||| || | | ||| | || | ||| | |||| Sbjct 50579 TCTTTACCAGTCTTTGATTTGACAATCTT-AATAAA--ATGATCCATAACACGTTGATCA 50523 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||||||| || || | |||| || ||| || |||| || | |||| Sbjct 50522 AAATCTTCACCACCTAAATGTGTATCACCACTCGTTGCAACAACTTCAAATACACCATTA 50463 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 || | | || | | ||||||| || |||||||| | |||| ||| | || | || Sbjct 50462 TCTATTGTTAATAATGATACATCAAATGTACCACCACCTAAATCATAAACCAATATACTC 50403 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 ||||| ||| | |||||||| ||| | |||| || || || || || ||||| Sbjct 50402 TTTTCTG---CTT---TCTTATCAAGCCCAAATGCAATTGCCGCTGCTGTAGGCTCATTT 50349 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 ||||| | | |||||| | |||||||||| ||||||||||| || ||||| | ||| Sbjct 50348 ATAATACGAATAACATTTAAACCAGCAATTGCACCTGCATCTTTTGTTGCTTGACGTTGA 50289 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 | ||| ||||| || || || |||||||| || |||| |||||||| | |||| ||| Sbjct 50288 GCATCATTAAAGTAGGCTGGTACAGTAATTACTGCATGTTTTACTTCTCTTCCAAGATAT 50229 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 || || |||| |||||||||| ||| | ||||| |||| || || || | | | Sbjct 50228 GCTTCAGCTGTTTCTTTCATTTTAGCTAATACCATTGCAGAAACTTCCTCAGGAGCAAGT 50169 Query 518390 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 518449 || || ||| || | | |||| | || ||| |||||| || | |||||||| | Sbjct 50168 TGTTTTTTCTCACCTTTAACTAATACCTGAATATAAGGTTTAGTATCTTTATTAATAATT 50109 Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA---CCA 518506 | | |||| || | | |||| ||||| | |||| ||| | | || Sbjct 50108 TCATATGGTAAGAGTGTTTTATCCTTCTGAAC---TGAATCATCTGAATAACGACGTCCT 50052 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | || || |||| || | || | | |||||| |||| ||||||| || ||| Sbjct 50051 ATAAGTCTCTTAACATCGAATAATGTTTGAGCTGGATTTATTGTTGCTTGATTCTTTGCT 49992 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 | || |||| || |||| || ||||| || |||||||||||||| | |||||| Sbjct 49991 GATTCACCAACAAGTCTTTCTTCATCAGTAAAGGAGACATATGATGGAGTAATACGATTA 49932 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 ||||||||||| | |||||| ||||| ||| ||| | | |||||||||| | | Sbjct 49931 CCTTGATCATTTGGAATAATCTCAACACGTCCACTTTTGTAAATACCTACACAAGAATAT 49872 Query 518687 GTTGTTCCTAAATCAATACCAATA 518710 || || || | ||||||||||||| Sbjct 49871 GTCGTACCAAGATCAATACCAATA 49848 >seq145 Length=489201 Score = 154 bits (170), Expect = 1e-31 Identities = 395/585 (68%), Gaps = 30/585 (5%) Strand=Plus/Minus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||| || |||||||| || ||||||| || | | || | || ||| || Sbjct 96288 ATTCTTCAGCCTCCCTAATCATCCTTTCAATTTCTTCATTACTTAAACCACCT-GATGAT 96230 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTT-TGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 | |||||| || ||| || ||| | ||| || || ||| | || ||||| | | Sbjct 96229 TG--AATAGTTAT-TTCGTGTTTTTTTCCTGTAGACTTGTCAACAGCTCCTACATTCAAA 96173 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || || ||||| | ||| || || ||||||||||| || || ||||| ||||||| Sbjct 96172 ATTCCGTTTGCATCTATATCGAAAGTAACTTCAATTTGTGGTACACCTCTGGGAGCAGGA 96113 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAG-TG--AATTTTCGT 517390 || || || || | |||| ||| || | || |||| ||| || |||| || Sbjct 96112 GGTATACCCATCATTTCAAATTCTCCAAGCATTTTGTTAT---TAGCTGCAAATTCTCTC 96056 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 ||||| | |||| || || |||| || |||||||||| | ||| | ||||||| Sbjct 96055 TCACCTTGAAAAACTTTTATTCCAACTTGTGTCTGATTATCTGCAGCAGTAGAAAATACT 95996 Query 517451 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 ||||||| ||| ||||| || ||||||| ||||| | || | || |||||| Sbjct 95995 TGACTTTTTTTAGTAGGTATTGTAGTATTTCTATTAATAAGACGAGTAAAAACTCCACCT 95936 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570 |||||||| ||| | ||||| ||||||||||| | || | | || || || || Sbjct 95935 AATGTTTCTATACCTAATGAAAGTGGAGTGACATCTAAAAGAAGTAAATCTTTAA---TT 95879 Query 517571 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC-ACCATATGCAACAGCTTC 517629 || || ||| || | | ||||||| || ||||| ||||| || |||||||| Sbjct 95878 TC-TCCTTTT-------AATACT-CCTGCTTGTATTGCAGCTCCCATA-GCTACAGCTTC 95829 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 517689 ||| ||||| ||| || | ||| ||| ||| |||| |||| | | || | Sbjct 95828 ATCGGGATTTACACCTTTTGATGGTTCTTTTCCA---AAAATATTTTTTACAGTTTCGAT 95772 Query 517690 TACCTTAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCAT 517733 ||| || || || | || | || || |||||||| | || ||||| Sbjct 95771 TACTTTTGGCATTCTAG-TCATCCCACCAACTAAAATAACTTCAT 95728 Score = 140 bits (154), Expect = 2e-27 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | |||||| || || || |||||||||||||||||||||||||||| ||||| Sbjct 95287 TTTTCCATACCATATGCCAATGCTGCAGCAGTTGGTTCATTAATAATTCTCATTACATTC 95228 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| || ||| ||||||||||| || ||||| | ||| || || ||||||||||| Sbjct 95227 AAACCTGCTATTGAACCTGCATCTTTTGTTGCTTGACGTTGAGAGTCATTAAAATATGCC 95168 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 |||||||| ||||| |||| | || || | || | ||||| || |||| |||| Sbjct 95167 GGAACAGTTATAACTGCATGTTTAACAGCTCTTCCCAGATAAGATTCAGCAGTTTCTTTC 95108 Query 518348 ATTTT 518352 ||||| Sbjct 95107 ATTTT 95103 Score = 95.1 bits (104), Expect = 9e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| ||||| | ||||| ||||||||||||||||| ||| | | |||| ||||| || Sbjct 95279 ACCATATGCCAATGCTGCAGCAGTTGGTTCATTAATAATTCTCATTACATTCAAACCTGC 95220 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 ||| | | | ||| |||||||| | || | ||||||||||||||| || ||||| Sbjct 95219 TATTGAACCTGCATCTTTTGTTGCTTGACGTTGAGAGTCATTAAAATATGCCGGAACAGT 95160 Query 322363 AATAACTGCTTTATTAATAG 322382 |||||||| | |||| || Sbjct 95159 TATAACTGCATGTTTAACAG 95140 >seq141 Length=88262 Score = 127 bits (140), Expect = 2e-23 Identities = 299/443 (67%), Gaps = 14/443 (3%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 || || |||||| ||||||| || |||||| ||| | |||| | || | |||||| || Sbjct 19929 TCAAAAGGATTAGTAACATTGTATATTTTTGAAATATC-AAGAGCAACTAATAATCTATC 19987 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAG-TTTACACG 397070 ||| ||| ||| ||||||||| | ||| ||| |||||||||||||| ||| | |||| | Sbjct 19988 AGCTACAAATTCAATATATTGTGTCATAAGTCTAGAATTCATACCAATAAGATCTACA-G 20046 Query 397071 GAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTG--GTA 397128 | | ||||||| | ||| | | ||||| |||| ||||| |||||||| ||| Sbjct 20047 GTAAAGAATCACATAAAAAGTTTCTTTCAACATCAACAGCTTCTGATATAATTTGTTGTA 20106 Query 397129 AACAACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTAC 397188 | | | ||| | || | || | || ||| || | |||||||| ||| | Sbjct 20107 CTCTAGAAATTGGT--AATTTAAATTTAAGTGATTTATAAATTAAACAAGCAAAATCTGC 20164 Query 397189 ATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATG 397248 |||| |||||||||| ||| |||| ||| || | | ||||||||||||| || Sbjct 20165 ATGTAAACCTTCATCACGACTAATTAATTCATTAGAAAATGTAAGACCAGGCATTA-ATC 20223 Query 397249 CATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCCACTAAAGAAAACGCCTTC 397308 || | |||||||||| || || | | || ||| ||| |||| ||||| Sbjct 20224 CA-----CGTTTTTTTAACCAAAATATAGCACAGAAACTACCAGAAAATAAAATACCTTC 20278 Query 397309 TACAATAGAGAATGCTACTAATTTGTGAGCATAAGTCTTATCAGATTTAATCCATTTATT 397368 || | ||||| | | |||| | | |||| | | |||| || |||||||| | Sbjct 20279 AACTGCACAGAATCCAATTAATCTTTCAGCAAATGAACGATCATTATTCATCCATTTTGT 20338 Query 397369 ACACCAATCAGCTTTCTTTTTAA 397391 ||| || ||||| ||||||| Sbjct 20339 TGCCCATTCTGCTTTTTTTTTAA 20361 >seq123 Length=148735 Score = 125 bits (138), Expect = 5e-23 Identities = 141/185 (76%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| || || | |||| |||||| ||||||||||| ||||||||||| |||| || || Sbjct 22147 AAAGTTGTTATTGATTTTTCTTCCCCAAATATTGCAAAAGAAATGCACGTTGGTCACTTG 22206 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGT 870912 ||||| ||||||||||| || ||||| || |||||||| || | || || || Sbjct 22207 AGATCCACTATTATTGGCGATACTATTGCAAGAATATTAGAATATCT-TGATTTTGAGGT 22265 Query 870913 TTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATAT 870972 | || |||||| | |||||||||||||||||||| || |||||||||| ||| | Sbjct 22266 GCTGAGAATAAATCATATTGGTGATTGGGGAACTCAATTTGGAATGTTAATTGAGTAT-T 22324 Query 870973 TAAAA 870977 ||||| Sbjct 22325 TAAAA 22329 >seq108 Length=231682 Score = 104 bits (114), Expect = 2e-16 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 366922 TATCATGCAGGTTTATCAAACGAACACAAAACAAAAACTCATACTAATTTTATCAATAAT 366981 |||||||||||||| || || | |||| ||| || | | ||| | ||||| Sbjct 82736 TATCATGCAGGTTTGTCTCTTAAAATTAGAACACAAATACAAAATGATTGGTTAGATAAT 82677 Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 |||||| | ||| | || | || ||||| ||||||||||| | ||||||| |||| Sbjct 82676 AAAATACAGATTCTCGTTGGTACTATAGCTTTTGGTATGGGAGTACATAAACCTAATGTA 82617 Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101 | |||||||||||| | | ||| | | |||||| |||||||||| ||| |||| Sbjct 82616 CGTTTTGTTATTCATTCTTCAATTCCTGAAAGTATTGATTCTTATTATCAACAAAGTGGT 82557 Query 367102 AGAGCAGGTCGTGAT 367116 ||||| ||||||||| Sbjct 82556 AGAGCTGGTCGTGAT 82542 >seq143 Length=280631 Score = 93.3 bits (102), Expect = 3e-13 Identities = 129/177 (73%), Gaps = 9/177 (5%) Strand=Plus/Minus Query 366973 ATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAA 367032 || ||| || ||| | || | | ||||| |||||||| || |||||||| ||||||||| Sbjct 73417 ATGAATGATGAAAAACAAGTAATGGTAGCAACAATAGCTTTCGGTATGGGAATTAATAAA 73358 Query 367033 CCGGATGTTAGAGTTGTTATTCA-TTATGGAGCTCCCAAGAATA-TTGAAGGTTATTATC 367090 ||||| ||| |||| ||||| |||| | | |||| | | ||||| ||||||| Sbjct 73357 AAAGATGTAAGACTTGTAATTCACTTATCCA--TGCCAAAATCACTTGAAAACTATTATC 73300 Query 367091 AAGAAATTGGTAGAGCAGGTCGTGATGGAGAAAAATCTTATTGTTATGCATTTTATA 367147 | |||| |||||||||||| | ||||| ||||| ||||| |||||||| Sbjct 73299 AGGAAAGTGGTAGAGCAGGAAGAGATGGTTTGGAATCT-----TTATGTATTTTATA 73248 >seq130 Length=374773 Score = 91.5 bits (100), Expect = 1e-12 Identities = 105/140 (75%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||||||| ||||||| ||| | | || ||| | || || | | Sbjct 323380 TTAA-AGGTAAAGAAGGTCGTTTTAGAGGCAATCTTAGTGGTAAAAGAGTTGACTTTAGT 323322 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| | | ||||| ||||| | | | ||||||||| ||||||| | Sbjct 323321 GGAAGAACTGTTATTTCACCAGATCCTAATATAGATGTTGATGAAGTTGTTGTTCCTATG 323262 Query 668969 ATTATTGCTAAAAATCTTAC 668988 |||||||| ||||| ||||| Sbjct 323261 ATTATTGCAAAAAAACTTAC 323242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780815204622370