Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq129 181 1e-40 >seq129 Length=387383 Score = 181 bits (200), Expect = 1e-40 Identities = 688/1067 (64%), Gaps = 47/1067 (4%) Strand=Plus/Minus Query 112286 TATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAA 112345 ||| ||| | |||||| || || || || || ||||| ||||| |||||| ||| Sbjct 182571 TATACTCCAAGCTCAAATAGAAACGGGGACTCCCTATATTTGCTACAAGGACGCCGCTAA 182512 Query 112346 CCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA---ACCTCTGTACAGA 112402 ||||| |||||||| || ||||| || | || ||| | ||||||||||||| Sbjct 182511 TCAAAAAAGTAATCAGAAAAATTTAGGC---ACCATTGTTTCTAGTAACCTCTGTACAGA 182455 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 || | || | ||| | | |||| | ||||| || ||| | ||||| || | || Sbjct 182454 GATTATAGAGTATACTAGCGCAAATGAAATTGCTGTCTGCAACTTGGCATCCATTGGACT 182395 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 ||||||| ||| ||| ||||| ||| || ||||||| ||| || ||| | ||||| || Sbjct 182394 TCCCAAGTTTGTTGATAAAGAGAAAAAAACTTTTGATTTTGACAAGCTCAAGGAAGTAAC 182335 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA---GAAATTTTT--ACCCCGTT 112577 || ||| || | |||| | || | ||||||||| | | | || || || | Sbjct 182334 AAAGGTTGTAACTAGAAACTTGAATAAGATTATTGATATTGGCTACTATTCAACTCC--T 182277 Query 112578 GAGACTGCTCGTAAA--TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTC 112635 || | || ||| || || | | ||| || || | || | ||||| ||||| | Sbjct 182276 GAAA--GC---AAAAGTTCCAACCTAAAACATCGACCTTTAGGAATTGGTGTTCAAGGAC 182222 Query 112636 TCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCA 112695 | || ||| ||||| | |||| ||| || || || | ||| || |||| | Sbjct 182221 TTGCAGATTGTTTCATGATGCTTCGCTTGCCATACGAGTCTGAGGGAGC-CAGAAAATTA 182163 Query 112696 A----TGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTG 112751 | || | || ||||| | || ||| |||| || | ||||| |||| || || Sbjct 182162 AACGTTGAG---ATTTTTGAATCTATCTATTACGCTGCCTTAGAGGCTAGTTGTGAATTA 182106 Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 112811 ||||| ||||| || |||||||||| ||||||||| || |||| | | Sbjct 182105 GCAGAAAAAGATGGACCTTATGAAACCTACTTGGGTTCTCCTGCAAGTAAAGGTATTTTA 182046 Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-----CTACGACTGGGACGCTCTCA 112866 |||||||| ||||||| | || | ||| | | ||| | ||| |||||| || | Sbjct 182045 CAATTTGACATGTGGGGA-GTTAAACCTAAC-TCAGGAATTTGCGATTGGGACCTACTTA 181988 Query 112867 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 112926 | || ||| || | || || | || | || ||||||| ||||| |||| Sbjct 181987 AACAAAAGATCTCCAAGCATGGACTAAGAAATTCCTTATTATTGGCACCTATGCCCACAG 181928 Query 112927 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCT 112986 | || ||| | || || ||||| ||||||||| | || || || | ||| | || || | Sbjct 181927 CATCTACCTCTCAGATATTGGGAAATAATGAAAGTTTCGAGCCTTTTACGTCAAATATTT 181868 Query 112987 ATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACC 113046 ||| | ||| || | || |||||| | || || || |||||| || ||||| Sbjct 181867 ATCATCGTAGAGTTCTATCCGGCGAGTTTTTCATCGTGAATCCACATCTCCTGAATGACT 181808 Query 113047 TCAAAGAGATTGGTCTCTGGTCCAAGGAT------ATGAAGGATCTCATGGTGAAAGCGG 113100 | ||| | || | ||| || ||| | || || | || | || | Sbjct 181807 TGCTCGAGCTAGGATTATGG---AATGATCGTCTCAAACAGAATATAATTGCTAACAACG 181751 Query 113101 GTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAG 113160 | || ||||||||||| | ||||||||| || || || || || |||| Sbjct 181750 GCAGT---ATTCAAAATATAGATTGTATTCCAGAAGATATACGAAATTTATATAAAACAG 181694 Query 113161 TTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTG 113220 ||||||||||||| ||| || ||||||||||| |||||| | || | | ||| Sbjct 181693 TTTGGGAAATCAAACAAAAGTCAGTAATTGACATGGCAGCAGATAGAGGACCTTATATTT 181634 Query 113221 ATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTA 113280 || |||| | ||||| || ||||||| | | | | | ||||| ||||||| Sbjct 181633 GCCAGTCTCAATCTCTGAATATACATATGGAAAATGCGAATTTTGCGAAGCTTTCTTCTA 181574 Query 113281 TGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 |||| | || | ||||| || ||||| || |||||||| |||||| Sbjct 181573 TGCATTTTTATGGCTGGAAAAAAGGTCTTAAGACGGGGATATATTAC 181527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741274904400