Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq120 132 1e-25 >seq120 Length=60016 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 |||||| ||||| |||||||| ||||| | | ||| | |||||||| | || || || Sbjct 32291 AGTGGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCCAATTGTTTTCC 32232 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||| || || | |||||||| || |||||||| ||||| || |||||||||||| || Sbjct 32231 TGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTTGCTTT 32172 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || ||||| || || || ||| ||||| | |||| ||||||||||| | ||| Sbjct 32171 AACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTCTTTCCTGTAAGAGT 32112 Query 195123 TTTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 32111 CTTAACAAAAATTTGCAT 32094 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| | || | ||| || ||||| |||||||| ||||| | | ||| | |||||| Sbjct 31849 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 31790 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | || || ||||| || || | |||||||| || |||||||| ||||| || ||| Sbjct 31789 TCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31730 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 ||||||||| || || || ||||| || || || ||| ||||| | |||| ||| Sbjct 31729 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTC 31670 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| | ||| || || || | |||||| Sbjct 31669 TTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31638 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| | || | ||| || ||||| |||||||| ||||| | | ||| | |||||| Sbjct 32077 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 32018 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | || || ||||| || || | |||||||| || |||||||| ||||| || ||| Sbjct 32017 TCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31958 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 ||||||||| || || || ||||| || || || ||| ||||| | |||| ||| Sbjct 31957 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAATAGTC 31898 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| | ||| || || || | |||||| Sbjct 31897 TTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 31866 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| | || | ||| || ||||| |||||||| ||||| | | ||| | |||||| Sbjct 31621 AAAACTAAATGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCT 31562 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | || || ||||| || || | |||||||| || |||||||| ||||| || ||| Sbjct 31561 TCCAATTGTTTCCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCT 31502 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 ||||||||| || || || ||||| || || || |||||| || | || | || Sbjct 31501 TGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCCACCTCTAATGTGATAGTT 31442 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| | || || || || | |||||| Sbjct 31441 TTCCCTGTAAGTGTCTTAACAAAAATTTGCAT 31410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479538791215