Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq130 100 2e-16 >seq130 Length=374773 Score = 100 bits (110), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| |||||||||||||| ||| |||| |||| ||||| || ||||| Sbjct 265101 TTCCTTCTGAATATTATAGTCCGAAAGAGTTCTGCCATCTTCCAATTGTTTACCAGCAAA 265042 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || || || || | || | ||||||||||| |||||| |||||| Sbjct 265041 GATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTTAGCTTTGACATT 264982 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| || ||| || || | || ||||| || || || || || || || Sbjct 264981 TTCAATAGTATCAGAGGGCTCGACCTCCAAAGTAATGGTCTTGCCTGTTAGTGTTTTTAC 264922 Query 34970 AAAGATCTGCATATTCGTAG 34989 |||||||||||| ||| ||| Sbjct 264921 AAAGATCTGCAT-TTCTTAG 264903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633026311560