Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq93 100 7e-16 >seq93 Length=13655 Score = 100 bits (110), Expect = 7e-16 Identities = 203/297 (68%), Gaps = 11/297 (4%) Strand=Plus/Minus Query 133895 ATTGATGGATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTT 133954 ||||| ||| |||||||||||| | || | ||||| || || || |||||| Sbjct 4468 ATTGAATCATTAAAAAATAATCCTAAAGAAAGAAGGCATATACTTACAGCTTGGAATCCA 4409 Query 133955 GGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTA--- 134011 || | || | ||||| | || |||||||||||| ||| ||||| | ||| Sbjct 4408 TCTGCATTATCTCAAATGGCATTACCACCATGTCATGTCTTATCTCAATATTACGTTGAT 4349 Query 134012 AATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTA 134071 ||||| || |||| | || | |||||||| | || |||||| || |||||| Sbjct 4348 AATGAAAATAGATTATGTTCTACTTTATATCAAAGAAGTTGTGATTTAGGTTTAGGATCT 4289 Query 134072 CCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTA 134131 ||||| || ||||| || ||| || | || | |||||||||||||||||| ||||| Sbjct 4288 CCATTTAATATTGCATCTTATGCAATGTTATGTATGATGTTAGCACAAGTTTGT-GGTTA 4230 Query 134132 GAAG-TTGGTGA---GTTTGTATGGATGGGTGGAGATGTTCACATTTATAAAAATCA 134184 ||| |||||| || | | || ||| |||| ||| |||||| ||||||| Sbjct 4229 TAAGCCTGGTGAACTAATTATTTTTAT---TGGTGATGCTCATATTTATGAAAATCA 4176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147588267992210