Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq123 113 5e-20 >seq123 Length=148735 Score = 113 bits (124), Expect = 5e-20 Identities = 210/303 (69%), Gaps = 9/303 (3%) Strand=Plus/Plus Query 56517 AGAAACATAAATT---TCATCACCAATACAGATTTGATTACCTTCTTTAACTGGTGTTCC 56573 ||||| |||| || ||||||||||| | ||||| | ||| ||| ||| | || Sbjct 29621 AGAAATATAATTTGATTCATCACCAATTAAAATTTGTTCTCCTGTAGAAACAGGTTTGCC 29680 Query 56574 ATCTTCCATTAAT-CGAGCTGTCATAATAGCTTTTTTACCACAATGACAAACTGCTTTTA 56632 || || || ||| | |||||| ||||||| |||||||||| ||| | || ||||| Sbjct 29681 ATATTT-ATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAATAACATATTGTTTTTA 29739 Query 56633 GTTCAATAAGTTTATCTGCAATCGCCAAAAGTTCTTTAGAACCTTCAAATAATTTTCCAG 56692 ||||||||||||||| || || | ||| | ||| || ||| |||||||| Sbjct 29740 TTTCAATAAGTTTATCAGCCCATGCAAGAAGATATTTGCTTCCAGAAAACAATTTTCCTT 29799 Query 56693 CGAAATCAGTCCTTAGTCCATAAGCCATA--ACAGGAACATTATATGTATCAACAATTCG 56750 ||||| || |||| || ||| |||| ||||||| ||| |||||||||| Sbjct 29800 GAAAATCTGTTCTTAAACCGTAA--CATAACACAGGAATATTTAGCTTATCAACAATAAT 29857 Query 56751 GCTTAATTGATGAACCTGTTCAGTTTTTAAAAACTGAGCTTCATCTACAAATACACAATG 56810 | | || | ||| || || || ||||||| ||| |||||||| || |||||||| Sbjct 29858 ACATGTATGTTTAACTTGATCTTTTGTTAAAAATTGACATTCATCTATAAGTACACAATC 29917 Query 56811 AAT 56813 ||| Sbjct 29918 AAT 29920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532667834537800