Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq123 93.3 5e-14 >seq123 Length=148735 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/252 (70%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 60917 AACAGCATTTCCATTGATATCAATACGAGCTACCATTGTAGCTTTCTTACCACAATGGCA 60976 ||||| || |||| ||||||| | | ||||||||||||||||||||||| || Sbjct 29669 AACAGGTTTGCCATATTTATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAATAACA 29728 Query 60977 CACACCTTTTAGTTCAACCAATTTATCAGCGCATTGCAA-TAGTGCTTTAGATCCCGGGA 61035 | ||||| ||||| | ||||||||| || ||||| || ||| ||| | | Sbjct 29729 TATTGTTTTTATTTCAATAAGTTTATCAGCCCA-TGCAAGAAGATATTTGCTTCCAGAAA 29787 Query 61036 ATAATTCTCCTCTGAAATCTGTTCTTAGTCCATATGCCATA--ACAGGAACATTGTAG-A 61092 | |||| |||| ||||||||||||| || || |||| ||||||| ||| ||| Sbjct 29788 ACAATTTTCCTTGAAAATCTGTTCTTAAACCGTA--ACATAACACAGGAATATT-TAGCT 29844 Query 61093 TATCTACGATTTTACACAAGTCTTGTACTTGAGCCGGTTCTAAAAATTGTGCTTCATCAA 61152 |||| || || |||| | || |||||| | | ||||||||| |||||| | Sbjct 29845 TATCAACAATAATACATGTATGTTTAACTTGATCTTTTGTTAAAAATTGACATTCATCTA 29904 Query 61153 TTAGTACACAAT 61164 | |||||||||| Sbjct 29905 TAAGTACACAAT 29916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540059821139800