Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq77 84.2 9e-11 >seq77 Length=115320 Score = 84.2 bits (92), Expect = 9e-11 Identities = 109/146 (75%), Gaps = 5/146 (3%) Strand=Plus/Minus Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759 || ||||||||||||||||||||| | || || || | |||||| || | ||||| | Sbjct 76984 ATTGTCATACGAGAAGGAATGGCATGTGGATTCATAATAATGTCGGGAATTATTCC--TT 76927 Query 309760 ATTGGGTTGAAAGGCATATCTTCT-TCAGGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818 ||||| | || |||||||||||| || || | | | || || ||||| ||||| | Sbjct 76926 CTTGGG-TAAATGGCATATCTTCTGTCCTATA-AGTTATTCCTATTGTTCCTTTTTGCCC 76869 Query 309819 GTGCCTGGAAGCAAACTTGTCACCAA 309844 ||||| || || || |||||||||| Sbjct 76868 ATGCCTAGATGCGAATTTGTCACCAA 76843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951970773597560