Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq120 158 2e-33 seq130 116 6e-21 >seq120 Length=60016 Score = 158 bits (174), Expect = 2e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | || || | |||||||| || ||||| | || ||||||| || | Sbjct 31639 TGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA- 31697 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| ||| ||||| ||||| || |||||| Sbjct 31698 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31757 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || |||||||| |||||||| || ||| | | || ||| | ||||||||| Sbjct 31758 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31817 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || |||||||| ||| | |||||||| ||||| | ||||| |||| Sbjct 31818 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTA 31866 Score = 158 bits (174), Expect = 2e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | || || | |||||||| || ||||| | || ||||||| || | Sbjct 31867 TGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA- 31925 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| ||| ||||| ||||| || |||||| Sbjct 31926 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31985 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || |||||||| |||||||| || ||| | | || ||| | ||||||||| Sbjct 31986 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32045 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || |||||||| ||| | |||||||| ||||| | ||||| |||| Sbjct 32046 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTA 32094 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | || ||| | ||||| ||||| || || | || || |||| || | Sbjct 31411 TGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGAACCATCA- 31469 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| ||| ||||| ||||| || |||||| Sbjct 31470 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31529 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || |||||||| |||||||| || ||| | | || ||| | ||||||||| Sbjct 31530 CAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31589 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || |||||||| ||| | |||||||| ||||| | ||||| |||| Sbjct 31590 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTA 31638 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 ||||||| || | || || | |||||||| || ||||| | || ||||||| || | Sbjct 32095 TGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA- 32153 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| ||||||| ||| ||||| ||| ||| ||||| ||||| || |||||| Sbjct 32154 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 32213 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | | || |||||||| |||||||| || ||| | | || ||| | ||||||||| Sbjct 32214 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32273 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || |||||||| ||| | ||||| || | || | ||||| |||| Sbjct 32274 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGCGTCTTAGAGGTGGTA 32322 >seq130 Length=374773 Score = 116 bits (128), Expect = 6e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||||||| ||||||| || || |||||| | || || || | | Sbjct 264911 TGCAGATCTTTGTAAAAACACTAACAGGCAAGACCATTACTTTGGAGGTCGAGCCCTCTG 264970 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||| || || || || || ||||| || ||||||| Sbjct 264971 ATACTATTGAAAATGTCAAAGCTAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCAAC 265030 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| ||||||||||| || ||| ||||| | | || ||||||| Sbjct 265031 AGCGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACTCTTTCGGACTATAATA 265090 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | || || ||||| || | ||| ||||| | || | ||||| ||| Sbjct 265091 TTCAGAAGGAATCTACCTTACATCTAGTACTGAGACTTAGAGGTGGT 265137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786164975073400