Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq116 86.0 8e-12 >seq116 Length=44781 Score = 86.0 bits (94), Expect = 8e-12 Identities = 177/261 (68%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 201909 ATTCAAAGTAAAATTTTTATAGGCCCAACATACTATCATCGTCTTAAACATATGGTTAAG 201968 ||| ||||| | |||||| |||| |||| | ||||| ||||||||||||||| Sbjct 19878 ATTGAAAGTTATATTTTTGTAGGACCAATTTTTTATCAAAAACTTAAACATATGGTTTTA 19819 Query 201969 GATAAAATGCATGCGAGAAGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTG- 202027 |||||||||||||| ||| || || | | || |||| | ||||| |||| Sbjct 19818 GATAAAATGCATGCTAGAGGTAGAGGACCTAGACAAATATTAACAAGACAACC-TACTGA 19760 Query 202028 TGGTCGGTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGT 202087 ||| | || ||| |||||| | ||| |||| |||||||||| ||||||| | | | Sbjct 19759 AGGTAGATCTAAAGATGGTGGTCTTAGACTTGGTGAAATGGAAAGAGATTGTTTAGTTGC 19700 Query 202088 TCATGGGGCCACACAATTTTTAAATGAAAGAATGTTTTTGTATTCAGATCCTTTTCAAAT 202147 |||| || | | || |||| ||||| | | | |||||||| ||| ||| Sbjct 19699 ATATGGAGCAAGTAATTTATTAATAGAAAGGTTAATGCTCAATTCAGATGTATTTGAAAC 19640 Query 202148 CGATGTGTGTACAAATTGTGG 202168 |||| |||| || ||||| Sbjct 19639 AAATGTATGTAACAAATGTGG 19619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655278812305000