Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq112 726 0.0 seq89 462 2e-124 seq145 149 5e-30 seq141 131 1e-24 seq123 125 5e-23 seq108 96.9 3e-14 seq130 95.1 9e-14 seq143 89.7 4e-12 >seq112 Length=84128 Score = 726 bits (804), Expect = 0.0 Identities = 1113/1568 (71%), Gaps = 28/1568 (2%) Strand=Plus/Plus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | |||| ||| || | || || ||||||||| Sbjct 81434 AGCATCATTAACCATACGTTCAATATCTTCTTTAGATAAACGACCCTTATCATTAGTAAT 81493 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||||| || || || || |||||| | |||| ||||| | ||||||||| Sbjct 81494 GGTAATTTTACTGCTCTTACCAGTACTCTTATCAACAGCAGAAACATTTAAAATACCATT 81553 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | ||||||||| || ||||||||||| || ||||| | || ||||| || || Sbjct 81554 AGCATCAATATCAAATGTTACCTCAATTTGAGGAACACCTCTAGGTGCTGGTGGAATACC 81613 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || |||| ||| |||| | || ||||||||| || | || ||||| || | Sbjct 81614 ATCTAAATGGAATTTTCCTAATAAATGATTATCTTTTGTCATAGCACGCTCACCTTCATA 81673 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 281628 || ||| || || || |||||||||||| ||| |||||||||||| | ||| || Sbjct 81674 AACTTGAATTAATACACCACTTTGATTATCTGCATATGTTGTAAATACTTGTGTTTTCTT 81733 Query 281629 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 ||||| || || || | ||||| | || ||||||| |||||| || |||||||| Sbjct 81734 TGCTGGAATAGTAGTATTACGTTCAATTAATTTTGTCATAACACCACCTGCAGTTTCTAA 81793 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGT-TT 281747 |||||| || | |||| ||||| | || | | || || | | || | | || Sbjct 81794 ACCAAGTGATAATGGAGCAACATCTAATAATAATAAATCCTGTACAGCTG-ATGATTGTT 81852 Query 281748 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 281807 ||| | |||||||||||| | ||||||||||||||||||||| ||||||||||||| Sbjct 81853 CTCCATTTAAAATAGCTGCTTGTACAGCAGCACCATATGCAACAGCCTCATCAGGATTAA 81912 Query 281808 CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGA-AG-TTGTCTTACCTTAG 281864 | || | | ||| ||||||||| || || | ||| | || || ||| || || | Sbjct 81913 TTGCTTTACATGGTTCTTTACCATTAAAGAATTCTTGTATGAGAGCTTGA---ACTTTTG 81969 Query 281865 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 281924 ||||||| | ||| || |||||||| |||| ||||| || | |||||||| | | Sbjct 81970 GAATACGTGTTGAACCACCAACTAAAACAACATCATGTACAGATCTTTTATCCATACTAG 82029 Query 281925 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTT 281984 |||| ||| |||||||| || || | | || | || | || | |||||||| Sbjct 82030 CATCCTTTAATACTTTTTCTACTGGAGCTAATGTTGCACGGAAATAATCAGCACAAAGTT 82089 Query 281985 CTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAA 282044 |||| ||| | || | | ||| | ||| ||||||||| ||||| |||| ||||| | Sbjct 82090 CTTCAAATCTTGCACGACTAATTGCAACAGAATAATCAATGCCTTCATACAATGAATCTA 82149 Query 282045 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 282104 ||||| || | |||||| |||||||||| || | |||||||||||||||| || | Sbjct 82150 ATTCAACTGTTGCTTGAGTTGAAGAAGATAATGTTCTTTTAGCACGTTCACATTGAGTTC 82209 Query 282105 TTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGTTTTAT-ATT--TTCTCTTG 282160 | ||||||| ||| || || | | | || ||||| | | ||| |||| || Sbjct 82210 TAAGTCTTCTTAAAGCACGAGCATTAGTTGTT-AAATCCATACCACGATTCTTTCTTTTA 82268 Query 282161 AAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTA 282220 ||||||| ||||| || || | | |||||||||||||||||| || || | ||| Sbjct 82269 AAATCTTGTACACAAAATTCAACTAATCTATTATCAAAATCTTCACCACCTAAATGTGTA 82328 Query 282221 TTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCA 282280 | |||| || ||| |||||| |||| |||||||||| || || | | |||||| Sbjct 82329 TCACCTGCTGTGGCTTTTACTTCAAAAATACCATCTTCAATAGTTAATAATGATACATCA 82388 Query 282281 TGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG----TTTTT 282336 || |||||||| | |||||||||||| ||||| ||||| | | || || Sbjct 82389 AATGTACCACCACCTAAATCAAAAATAAGAACATT----TCTTTCACCAGTACCCTTCTT 82444 Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 |||||||||||| |||| ||| || || ||||||||||||||||| | || |||||| | Sbjct 82445 ATCAAGACCATATGCAATAGCTGCTGCTGTTGGTTCATTAATAATACGCATAACATTTAA 82504 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 |||||||||| || |||||||| || ||||| | ||| ||||| |||||||||||||| Sbjct 82505 ACCAGCAATTGCACCAGCATCTTTTGTTGCTTGACGTTGAGAATCATTAAAATATGCAGG 82564 Query 282457 AACAGTAATAACGGCATCTGTTACTTCT-TTTCCAATATAAGCGCTTGCTGTTTGTTTCA 282515 || |||| || |||| | ||| || | || | |||||| || | | | |||| Sbjct 82565 TACTGTAACTACTGCAT-TCTTAATTGTACGACCTAAATAAGCTTCTGATATCTCCTTCA 82623 Query 282516 TTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGAT 282575 | || ||||| ||||| ||||||| ||||| | | ||| || ||| | || Sbjct 82624 TCTTTTGTAAAACCATTGCAGAAATTTCTTCTGCATGAAATTCTTTTTTCTCACCTAAAT 82683 Query 282576 ATGATACTTCAAAATA-TGGTTTA---TTACCAACATTAATAACTTTAAATGGCCAATAT 282631 | ||| | || || ||||||| || | | ||| ||||||||||||||||| Sbjct 82684 AACTTAC-ACTAATTATTGGTTTATCTTTTGGACCTCTAACAACTTTAAATGGCCAATGA 82742 Query 282632 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 282691 ||||||| ||| || ||| |||| || | ||||||||| || |||||||||||| Sbjct 82743 GTCATATCACTTTGTACTGCTTGATCATCGAATTTTCTACCAATCAAACGTTTTGCATCA 82802 Query 282692 AAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 282751 || | ||| || ||||||| ||| | |||| || |||||||| ||||| | | || Sbjct 82803 AATACAGTGTTTTCTGGATTACGAGCAACCTGATTCTTAGCTGCATCACCAATTAAACGT 82862 Query 282752 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 282811 || | || ||||||| ||||||||||||||| || ||||||||||||||||| | |||| Sbjct 82863 TCACTGTCAGTAAATGCAACATATGATGGAGTAGTACGATTACCTTGATCATTTGGAATA 82922 Query 282812 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 282871 || || ||| || ||||| |||||||||||| || | ||||| || ||||||||| Sbjct 82923 ATATCTACTGTATCATTTCTCCATACACCTACGCATGAGTATGTTGTACCCAAATCAATA 82982 Query 282872 CCAATAGC 282879 |||||||| Sbjct 82983 CCAATAGC 82990 Score = 127 bits (140), Expect = 2e-23 Identities = 211/302 (70%), Gaps = 21/302 (7%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTT-CT--AAATACT 86016 ||||||||||| || || |||||||||| ||||| ||| | || || ||| | Sbjct 82302 TCAAAATCTTCACCACCTAAATGTGTAT---CACCTGCTGTGGCTTTTACTTCAAAAATA 82358 Query 86017 CCATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATT 86076 |||| | ||| | | ||| || ||||| ||||| ||| | ||||| ||| ||| || Sbjct 82359 CCATCTTCAATAGTTAATAATGATACATCAAATGTACCACCACCTAAATCAAAAATAAGA 82418 Query 86077 ACGTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCT 86133 || || | ||||||| || || ||| | ||| ||||||| |||| Sbjct 82419 ACATTTCTTTCACCAGTACCCTTCTTA------TCA------AGACCATATGCAATAGCT 82466 Query 86134 GCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCA 86193 ||||| |||||||||||||| || | ||||| |||||| |||||| | ||| ||| Sbjct 82467 GCTGCTGTTGGTTCATTAATAATACGCATAACATTTAAACCAGCAATTGCACCAGCATCT 82526 Query 86194 AGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTA 86253 |||||||| | || | |||||||||||||| ||||| |||| ||||| || ||| Sbjct 82527 TTTGTTGCTTGACGTTGAGAATCATTAAAATATGCAGGTACTGTAACTACTGCATTCTTA 82586 Query 86254 AT 86255 || Sbjct 82587 AT 82588 >seq89 Length=60508 Score = 462 bits (512), Expect = 2e-124 Identities = 1061/1584 (67%), Gaps = 39/1584 (2%) Strand=Plus/Minus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 |||||| ||||| |||||| || ||||| ||||||| | ||||| | |||| ||| Sbjct 51404 TTATCTTCTTCTGCAAATTGTTCTGCTTCCTTAATCATACGTTCAATATCTTCTTGAGAA 51345 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 281425 | |||||| || ||| ||||||||||| || | ||||| || |||||| Sbjct 51344 AGTCTTCCTTTATCATTTGTAATAGTAATCTTTTCAGATTTACCAGTACCTTTATCTTTA 51285 Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | || | | |||||||| | ||| | |||||||| ||||| ||||||||||| Sbjct 51284 GCACTTACTTGTAAAATACCATCAGTATCAATTTCAAATGTAACTTCTATTTGAGGGACA 51225 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| ||||||| || || || | | |||| | || ||| ||||||||| ||| Sbjct 51224 CCTCTTGGAGCAGGAGGTATTCCAGTAAGTTCAAATTTACCAAGAAGATTATTATCCTTA 51165 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | |||||||| || |||| ||| || || | | |||||||||| ||| Sbjct 51164 GTCATTGGACGTTCACCTTCAAAAACTTGTATCAATACAGCGGGTTGATTATCTTGATAT 51105 Query 281606 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 281665 || |||| ||| | ||||||| ||||| || || | | ||||| || ||| Sbjct 51104 GTACTAAAGACTTGGCTTTTTTTAGTAGGAACAACAGTATTACGAGAAATAAGTTTAGTC 51045 Query 281666 ATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 281725 |||| ||||||| | || || | ||| | | | |||||| ||||| | || ||| Sbjct 51044 ATAACACCACCAACAGTCTCAATACCCAATGTTAAAGGAGTAACATCCAATA-----ATA 50990 Query 281726 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 281785 | || | | | || ||| | | ||| ||||||||| |||||||||||| Sbjct 50989 AT----AGATCACTACCTCCTTCGCCAGCTAATATACCTGCTTGAACTGCAGCACCATAT 50934 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 281845 |||||||||||||||||||||| | |||| ||| ||||||| ||| || | | | Sbjct 50933 GCAACAGCTTCATCAGGATTAATACCACGATTTGGTTCCTTACCATCGAAGAATTCTTTA 50874 Query 281846 AG--AAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 | ||| ||| || ||||| ||||| | || || |||||||| |||||||||| Sbjct 50873 ATTAAAGATTGAATT---TTAGGGATACGTGTAGAACCACCAACTAAAACAATTTCATCA 50817 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 || | ||||| | | || ||| ||||||||| | || || || | | Sbjct 50816 ACATCAGATTTTTTGATACCTGCATCATCTAAAACTTTCTGTACAGGATCTATTGTTTTT 50757 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCA 282022 || || || || | | | ||| || ||||||||||| |||||||| || | ||| Sbjct 50756 CTGAATAAATCAGCATTTAATTCATCAAATTTAGCTCTTGTAAGAGTTTCACTTAGATCT 50697 Query 282023 ATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGT 282082 | ||||| | ||| |||| |||||| || ||| | ||| |||| || | | Sbjct 50696 ACACCTTCCATTAAACCTTCAATTTCAATTTTAACTTGTGGAACAGATGATAACGCTCTT 50637 Query 282083 TTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT--TTTG-CTGATTGATTCAAA 282139 || | || | || | || ||| || |||| ||| |||| | |||| | | | Sbjct 50636 TTTGATTTCTCTACTTCTCTTCTAAGTTTTTGTAACGCTCTTTTGTCAGATT---TTATA 50580 Query 282140 TCTGTTTTATATTTTCTCTTGA-AATCTTCAACACACCATGTTACA--AGACGATTATCA 282196 ||| | | ||| |||| |||||| || | | ||| | || | ||| | |||| Sbjct 50579 TCTTTACCAGTCTTTGATTTGACAATCTT-AATAAA--ATGATCCATAACACGTTGATCA 50523 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 ||||||||||| || || | |||| || ||| || |||| || | |||| Sbjct 50522 AAATCTTCACCACCTAAATGTGTATCACCACTCGTTGCAACAACTTCAAATACACCATTA 50463 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 || | | || | | |||||| || |||||||| | |||| ||| | || | || Sbjct 50462 TCTATTGTTAATAATGATACATCAAATGTACCACCACCTAAATCATAAACCAATATACTC 50403 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 ||||| ||| | |||||||| ||| | |||| || || || || || ||||| Sbjct 50402 TTTTCTG---CTT---TCTTATCAAGCCCAAATGCAATTGCCGCTGCTGTAGGCTCATTT 50349 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 ||||| | | |||||| | |||||||||| ||||||||||| || ||||| | ||| Sbjct 50348 ATAATACGAATAACATTTAAACCAGCAATTGCACCTGCATCTTTTGTTGCTTGACGTTGA 50289 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 | ||| ||||| || || || |||||||| || |||| | |||||||| |||||| ||| Sbjct 50288 GCATCATTAAAGTAGGCTGGTACAGTAATTACTGCATGTTTTACTTCTCTTCCAAGATAT 50229 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 || ||||||| |||||||||| ||| | ||||| |||| || || |||| | | Sbjct 50228 GCTTCAGCTGTTTCTTTCATTTTAGCTAATACCATTGCAGAAACTTCCTCAGGAGCAAGT 50169 Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616 || || ||| || | | |||| | || ||| |||||| || | |||||||| | Sbjct 50168 TGTTTTTTCTCACCTTTAACTAATACCTGAATATAAGGTTTAGTATCTTTATTAATAATT 50109 Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA---CCA 282673 | | |||| | | | |||| ||||| | |||| ||| | | || Sbjct 50108 TCATATGGTAAGAGTGTTTTATCCTTCTGAAC---TGAATCATCTGAATAACGACGTCCT 50052 Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCT 282733 || | || || |||| || | || | | |||||| | || ||||||| || ||| Sbjct 50051 ATAAGTCTCTTAACATCGAATAATGTTTGAGCTGGATTTATTGTTGCTTGATTCTTTGCT 49992 Query 282734 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 282793 | || |||| || |||| || ||||| || |||||||||||||| | |||||| Sbjct 49991 GATTCACCAACAAGTCTTTCTTCATCAGTAAAGGAGACATATGATGGAGTAATACGATTA 49932 Query 282794 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853 ||||||||||| | |||||| ||||| ||| ||| | | |||||||||| | | Sbjct 49931 CCTTGATCATTTGGAATAATCTCAACACGTCCACTTTTGTAAATACCTACACAAGAATAT 49872 Query 282854 GTTGTTCCTAAATCAATACCAATA 282877 || || || | ||||||||||||| Sbjct 49871 GTCGTACCAAGATCAATACCAATA 49848 >seq145 Length=489201 Score = 149 bits (164), Expect = 5e-30 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | |||||| || || || |||||||||||||||||||||||||||| ||||| Sbjct 95287 TTTTCCATACCATATGCCAATGCTGCAGCAGTTGGTTCATTAATAATTCTCATTACATTC 95228 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| || ||| ||||||||||| || ||||| | ||| || || ||||||||||| Sbjct 95227 AAACCTGCTATTGAACCTGCATCTTTTGTTGCTTGACGTTGAGAGTCATTAAAATATGCC 95168 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 |||||||| ||||| |||| | | || || |||| | ||||| || |||| |||| Sbjct 95167 GGAACAGTTATAACTGCATGTTTAACAGCTCTTCCCAGATAAGATTCAGCAGTTTCTTTC 95108 Query 282515 ATTTT 282519 ||||| Sbjct 95107 ATTTT 95103 Score = 149 bits (164), Expect = 5e-30 Identities = 394/585 (67%), Gaps = 30/585 (5%) Strand=Plus/Minus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||| || |||||||| || ||||||| || | | || | || ||| || Sbjct 96288 ATTCTTCAGCCTCCCTAATCATCCTTTCAATTTCTTCATTACTTAAACCACCT-GATGAT 96230 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTT-TGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 | |||||| || ||| || ||| | ||| || || ||| | || ||||| | | Sbjct 96229 TG--AATAGTTAT-TTCGTGTTTTTTTCCTGTAGACTTGTCAACAGCTCCTACATTCAAA 96173 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || || ||||| | ||| || || ||||||||||| || || ||||| ||||||| Sbjct 96172 ATTCCGTTTGCATCTATATCGAAAGTAACTTCAATTTGTGGTACACCTCTGGGAGCAGGA 96113 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAG-TG--AATTTTCGT 281557 || || || || | |||| ||| || | || |||| ||| || |||| || Sbjct 96112 GGTATACCCATCATTTCAAATTCTCCAAGCATTTTGTTAT---TAGCTGCAAATTCTCTC 96056 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 ||||| | |||| || || |||| || |||||||||| | ||| | ||||||| Sbjct 96055 TCACCTTGAAAAACTTTTATTCCAACTTGTGTCTGATTATCTGCAGCAGTAGAAAATACT 95996 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 ||||||| ||| ||||| || ||||||| ||||| | || | || ||||| Sbjct 95995 TGACTTTTTTTAGTAGGTATTGTAGTATTTCTATTAATAAGACGAGTAAAAACTCCACCT 95936 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737 |||||||| ||| | ||||| ||||||||||| | || | | || || || || Sbjct 95935 AATGTTTCTATACCTAATGAAAGTGGAGTGACATCTAAAAGAAGTAAATCTTTAA---TT 95879 Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC-ACCATATGCAACAGCTTC 281796 || || ||| || | | ||||||| || ||||| ||||| || |||||||| Sbjct 95878 TC-TCCTTTT-------AATACT-CCTGCTTGTATTGCAGCTCCCATA-GCTACAGCTTC 95829 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| ||||| ||| || | ||| ||| ||| |||| |||| | | || | Sbjct 95828 ATCGGGATTTACACCTTTTGATGGTTCTTTTCCA---AAAATATTTTTTACAGTTTCGAT 95772 Query 281857 TACCTTAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCAT 281900 ||| || || || | || | || || |||||||| | || ||||| Sbjct 95771 TACTTTTGGCATTCTAG-TCATCCCACCAACTAAAATAACTTCAT 95728 Score = 95.1 bits (104), Expect = 9e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177 ||| ||||| | ||||| ||||||||||||||||| ||| | | |||| ||||| || Sbjct 95279 ACCATATGCCAATGCTGCAGCAGTTGGTTCATTAATAATTCTCATTACATTCAAACCTGC 95220 Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237 ||| | | | ||| |||||||| | || | ||||||||||||||| || ||||| Sbjct 95219 TATTGAACCTGCATCTTTTGTTGCTTGACGTTGAGAGTCATTAAAATATGCCGGAACAGT 95160 Query 86238 AATAACTGCTTTATTAATAG 86257 |||||||| | |||| || Sbjct 95159 TATAACTGCATGTTTAACAG 95140 >seq141 Length=88262 Score = 131 bits (144), Expect = 1e-24 Identities = 300/443 (68%), Gaps = 14/443 (3%) Strand=Plus/Plus Query 161051 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 161109 || || |||||| ||||||| || |||||| ||| | |||| | || | |||||| || Sbjct 19929 TCAAAAGGATTAGTAACATTGTATATTTTTGAAATATC-AAGAGCAACTAATAATCTATC 19987 Query 161110 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAG-TTTACACG 161168 ||| ||| ||| ||||||||| | ||| ||| |||||||||||||| ||| | |||| | Sbjct 19988 AGCTACAAATTCAATATATTGTGTCATAAGTCTAGAATTCATACCAATAAGATCTACA-G 20046 Query 161169 GAAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTG--GTA 161226 | | ||||||| | ||| | | ||||| |||| ||||| |||||||| ||| Sbjct 20047 GTAAAGAATCACATAAAAAGTTTCTTTCAACATCAACAGCTTCTGATATAATTTGTTGTA 20106 Query 161227 AACAACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTAC 161286 | | | ||| | || | || | || ||| || | |||||||| ||| | Sbjct 20107 CTCTAGAAATTGGT--AATTTAAATTTAAGTGATTTATAAATTAAACAAGCAAAATCTGC 20164 Query 161287 ATGTTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATG 161346 |||| |||||||||| ||| |||| ||| || | | ||||||||||||| || Sbjct 20165 ATGTAAACCTTCATCACGACTAATTAATTCATTAGAAAATGTAAGACCAGGCATTA-ATC 20223 Query 161347 CATTTCTCTAGTTTTTAACCAGAAAATCGAAGCAAATGATCCACTAAAGAAAACGCCTTC 161406 || | |||||||||| || || | | || ||| ||| |||| ||||| Sbjct 20224 CA-----CGTTTTTTTAACCAAAATATAGCACAGAAACTACCAGAAAATAAAATACCTTC 20278 Query 161407 TACAATAGAGAATGCTACTAATTTGTGAGCATATGTCTTATCAGATTTAATCCATTTATT 161466 || | ||||| | | |||| | | |||| ||| |||| || |||||||| | Sbjct 20279 AACTGCACAGAATCCAATTAATCTTTCAGCAAATGAACGATCATTATTCATCCATTTTGT 20338 Query 161467 ACACCAATCAGCTTTCTTTTTAA 161489 ||| || ||||| ||||||| Sbjct 20339 TGCCCATTCTGCTTTTTTTTTAA 20361 >seq123 Length=148735 Score = 125 bits (138), Expect = 5e-23 Identities = 141/185 (76%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 637117 aaaaTTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| || || | |||| |||||| ||||||||||| ||||||||||| |||| || || Sbjct 22147 AAAGTTGTTATTGATTTTTCTTCCCCAAATATTGCAAAAGAAATGCACGTTGGTCACTTG 22206 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGT 637235 ||||| ||||||||||| || ||||| || |||||||| || | || || || Sbjct 22207 AGATCCACTATTATTGGCGATACTATTGCAAGAATATTAGAATATCT-TGATTTTGAGGT 22265 Query 637236 TTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATAT 637295 | || |||||| | |||||||||||||||||||| || |||||||||| ||| | Sbjct 22266 GCTGAGAATAAATCATATTGGTGATTGGGGAACTCAATTTGGAATGTTAATTGAGTAT-T 22324 Query 637296 TAAAA 637300 ||||| Sbjct 22325 TAAAA 22329 >seq108 Length=231682 Score = 96.9 bits (106), Expect = 3e-14 Identities = 142/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 131105 TATCATGCAGGTTTATC----AAACGAACACAAGACAAAAACTCATACTAATTTTATCAA 131160 |||||||||||||| || ||| | | || ||||| || | | | ||| | | Sbjct 82736 TATCATGCAGGTTTGTCTCTTAAA--ATTAGAACACAAATAC--AAAATGATTGGTTAGA 82681 Query 131161 TAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGA 131220 |||||||||| | ||| | || | || ||||| ||||||||||| | ||||||| | Sbjct 82680 TAATAAAATACAGATTCTCGTTGGTACTATAGCTTTTGGTATGGGAGTACATAAACCTAA 82621 Query 131221 TGTTAGAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAAT 131280 ||| | |||||||||||| | ||| | | |||||| |||||||||| ||| Sbjct 82620 TGTACGTTTTGTTATTCATTCTTCAATTCCTGAAAGTATTGATTCTTATTATCAACAAAG 82561 Query 131281 TGGTAGAGCAGGTCGTGAT 131299 ||||||||| ||||||||| Sbjct 82560 TGGTAGAGCTGGTCGTGAT 82542 >seq130 Length=374773 Score = 95.1 bits (104), Expect = 9e-14 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 432270 ATGTCTGAAAGATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGT 432329 ||||| || || | | |||||||||||||||| ||||||| ||| | | || || | Sbjct 323391 ATGTC--AACGACTTAAAGGTAAAGAAGGTCGTTTTAGAGGCAATCTTAGTGGTAAAAGA 323334 Query 432330 GTCGATATGTCTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTT 432389 || || | || | | || |||||| | | ||||||||||| | | | |||||||| Sbjct 323333 GTTGACTTTAGTGGAAGAACTGTTATTTCACCAGATCCTAATATAGATGTTGATGAAGTT 323274 Query 432390 GGTGTTCCTCTCATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAAT 432449 | ||||||| | |||||||| ||||| ||||| | |||| || | | | |||| Sbjct 323273 GTTGTTCCTATGATTATTGCAAAAAAACTTACATACCCTGAAAGAGTTAATGCAATTAAT 323214 Query 432450 ATTGATTATTT 432460 ||||||| ||| Sbjct 323213 ATTGATTCTTT 323203 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/192 (72%), Gaps = 7/192 (4%) Strand=Plus/Minus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTA-ATACAGCTATTAAAA 435190 |||||| || || || |||| |||| | |||||| ||| || ||||||| | |||| Sbjct 321879 TGAATTCTTTTTTCATACAATGTCTGGAAGAGAAGGT-TTAGTAGATACAGCAGTAAAAA 321821 Query 435191 CTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTT--GAAGATATTAAACA 435248 |||| || || |||||||| ||||||| | | || ||| |||| |||||| || Sbjct 321820 CTGCAGAAACAGGTTATATGCAAAGAAGATTAGTAAAG--GCTTTAGAAGATCTTTGTAT 321763 Query 435249 AGAATATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCATGTGTTTATGGTGA 435308 | |||||||| || || |||| | |||| || |||| || |||||||||||| Sbjct 321762 AAAATATGATCAAACTGTAAGAACTAGTGATGGACAAATTATTCAATTTGTTTATGGTGA 321703 Query 435309 TAATGGTATTAA 435320 | |||| ||||| Sbjct 321702 TGATGG-ATTAA 321692 >seq143 Length=280631 Score = 89.7 bits (98), Expect = 4e-12 Identities = 128/177 (72%), Gaps = 9/177 (5%) Strand=Plus/Minus Query 131156 ATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAA 131215 || ||| || ||| | || | | ||||| |||||||| || |||||||| ||||||||| Sbjct 73417 ATGAATGATGAAAAACAAGTAATGGTAGCAACAATAGCTTTCGGTATGGGAATTAATAAA 73358 Query 131216 CCGGATGTTAGAGTTGTTATTCA-TTACGGAGCTCCCAAGAATA-TTGAAGGTTATTATC 131273 ||||| ||| |||| ||||| ||| | | |||| | | ||||| ||||||| Sbjct 73357 AAAGATGTAAGACTTGTAATTCACTTATCCA--TGCCAAAATCACTTGAAAACTATTATC 73300 Query 131274 AAGAAATTGGTAGAGCAGGTCGTGATGGAGAAAAATCTTATTGTTATGCATTTTATA 131330 | |||| |||||||||||| | ||||| ||||| ||||| |||||||| Sbjct 73299 AGGAAAGTGGTAGAGCAGGAAGAGATGGTTTGGAATCT-----TTATGTATTTTATA 73248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740623281112770