Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_025449.1 Length=166783 Score E Sequences producing significant alignments: (Bits) Value seq123 95.1 1e-14 >seq123 Length=148735 Score = 95.1 bits (104), Expect = 1e-14 Identities = 215/318 (68%), Gaps = 9/318 (3%) Strand=Plus/Plus Query 56264 ATGTTTTCTACACAAAGAAACATAAATT---TCATCACCAATACAGATTTGATTACCTTC 56320 ||| || | ||| | ||||| |||| || ||||||||||| | ||||| | ||| Sbjct 29606 ATGATTACGACAAACAGAAATATAATTTGATTCATCACCAATTAAAATTTGTTCTCCTGT 29665 Query 56321 TTTAACTGGTGTTCCATCTTCCATTAAT-CGAGCTGTCATAATCGCTTTTTTGCCACAAT 56379 ||| ||| | |||| || || ||| | |||||| | ||||| || ||||||| Sbjct 29666 AGAAACAGGTTTGCCATATTT-ATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAAT 29724 Query 56380 GACAAACTGCTTTTAGTTCAATAAGTTTATCTGCAATCGCCAAAAGTTCTTTAGAACCTT 56439 ||| | || ||||| ||||||||||||||| || || | ||| | ||| || Sbjct 29725 AACATATTGTTTTTATTTCAATAAGTTTATCAGCCCATGCAAGAAGATATTTGCTTCCAG 29784 Query 56440 CAAATAATTTTCCAGCGAAATCAGTCCTTAGTCCATAAGCCATA--ACAGGAACATTATA 56497 ||| |||||||| ||||| || |||| || ||| |||| ||||||| ||| Sbjct 29785 AAAACAATTTTCCTTGAAAATCTGTTCTTAAACCGTAA--CATAACACAGGAATATTTAG 29842 Query 56498 TGTATCAACAATTCGGCTTAATTGATGCACCTGTTTAGTTTTTAAAAACTGGGCTTCATC 56557 |||||||||| | | || | || || | || ||||||| || |||||| Sbjct 29843 CTTATCAACAATAATACATGTATGTTTAACTTGATCTTTTGTTAAAAATTGACATTCATC 29902 Query 56558 TACAAATACACAATGAAT 56575 || || |||||||| ||| Sbjct 29903 TATAAGTACACAATCAAT 29920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533576632890600