Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq123 107 2e-18 >seq123 Length=148735 Score = 107 bits (118), Expect = 2e-18 Identities = 217/317 (68%), Gaps = 9/317 (3%) Strand=Plus/Plus Query 60970 TGTTTTCTACACAAAGAAACATAAATT---TCATCACCAATACAGATTTGATTACCTTCT 61026 || || | ||| | ||||| |||| || ||||||||||| | ||||| | ||| Sbjct 29607 TGATTACGACAAACAGAAATATAATTTGATTCATCACCAATTAAAATTTGTTCTCCTGTA 29666 Query 61027 TTAACTGGTGTTCCATCTTCCATTAAT-CGAGCTGTCATAATCGCTTTTTTACCACAATG 61085 ||| ||| | |||| || || ||| | |||||| | ||||| |||||||||| Sbjct 29667 GAAACAGGTTTGCCATATTT-ATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAATA 29725 Query 61086 ACAAACTGCTTTTAGTTCAATAAGTTTATCTGCAATCGCCAAAAGTTCTTTAGAACCTTC 61145 ||| | || ||||| ||||||||||||||| || || | ||| | ||| || Sbjct 29726 ACATATTGTTTTTATTTCAATAAGTTTATCAGCCCATGCAAGAAGATATTTGCTTCCAGA 29785 Query 61146 AAATAATTTTCCAGCGAAATCAGTCCTTAGACCATAAGCCATA--ACAGGAACATTATAT 61203 ||| |||||||| ||||| || |||| ||| ||| |||| ||||||| ||| Sbjct 29786 AAACAATTTTCCTTGAAAATCTGTTCTTAAACCGTAA--CATAACACAGGAATATTTAGC 29843 Query 61204 GTATCAACAATTCGGCTTAATTGATGCACCTGTTCAGTTTTTAAAAACTGGGCTTCATCT 61263 |||||||||| | | || | || || || || ||||||| || ||||||| Sbjct 29844 TTATCAACAATAATACATGTATGTTTAACTTGATCTTTTGTTAAAAATTGACATTCATCT 29903 Query 61264 ACAAATACACAATGAAT 61280 | || |||||||| ||| Sbjct 29904 ATAAGTACACAATCAAT 29920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527867843237800