Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq120 98.7 8e-16 seq130 89.7 4e-13 >seq120 Length=60016 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || | || || ||||| ||||| | ||| |||||| Sbjct 31638 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31697 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||||| || || ||||| | || ||||||| Sbjct 31698 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31757 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| | ||| | ||||| || Sbjct 31758 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31817 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||| |||||||||| || Sbjct 31818 ATTCAGAAAGAATCTACTTTACATTTAGTTTT 31849 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || | || || ||||| ||||| | ||| |||||| Sbjct 31866 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31925 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||||| || || ||||| | || ||||||| Sbjct 31926 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31985 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| | ||| | ||||| || Sbjct 31986 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32045 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||| |||||||||| || Sbjct 32046 ATTCAGAAAGAATCTACTTTACATTTAGTTTT 32077 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||| || | || || ||||| ||||| | ||| |||||| Sbjct 32094 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 32153 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| ||||||| || || ||||| | || ||||||| Sbjct 32154 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 32213 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| | ||| | ||||| || Sbjct 32214 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32273 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || |||||||| || ||||||| || Sbjct 32274 ATTCAGAAAGAATCCACTTTACATTTGGT 32302 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313 |||| ||||||||||||||||| ||| | || || || || || || | || ||| Sbjct 31404 TTAAGGATGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGAA 31463 Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373 || ||| | ||| | || ||| ||||||| || || ||||| | || | Sbjct 31464 CCATCAGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCT 31523 Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433 ||||||||| | | || | ||| || |||||||| |||||| | ||| | ||| Sbjct 31524 GATCAACAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTACTTTATCTGAT 31583 Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || || || ||||||||||| |||||||||| || Sbjct 31584 TATAATATTCAGAAAGAATCTACTTTACATTTAGTTTT 31621 >seq130 Length=374773 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 106258 AAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCG 106317 ||||||| || ||||| |||||| | || |||||||||||||| |||| || ||| Sbjct 264908 AAATGCAGATCTTTGTAAAAACACTAACAGGCAAGACCATTACTTTGGAGGTCGAGCCCT 264967 Query 106318 GCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATC 106377 ||| || ||| | || ||| || ||| ||||| || || | || ||||| Sbjct 264968 CTGATACTATTGAAAATGTCAAAGCTAAGATTCAGGACAAGGAGGGAATTCCTCCTGATC 265027 Query 106378 AACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACA 106437 |||| | | || | ||| || |||||||| |||||| | |||| | || || | Sbjct 265028 AACAGCGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACTCTTTCGGACTATA 265087 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 | || || || |||||||| ||||| ||||| |||| Sbjct 265088 ATATTCAGAAGGAATCTACCTTACATCTAGTACTGAG 265124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402328889008160