Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq120 91.5 1e-13 seq130 86.0 5e-12 >seq120 Length=60016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 |||| ||||||||||| || || ||||| |||||||| || || | | | | | || | Sbjct 32308 CGCAGGACCAAATGTAAAGTGGATTCTTTCTGAATATTATAATCAGATAAAG-TACGACC 32250 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||||| | ||||| || || | || | ||| |||||||| || || | ||| || || Sbjct 32249 ATCTTCCAATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTT 32190 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||| || || ||| | |||| | || |||| | ||| ||||||| || || Sbjct 32189 ATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCTACTTCTAATGTAAT 32130 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || ||||| || ||||| ||||||||| Sbjct 32129 AGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCATA 32093 >seq130 Length=374773 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTCGT 27093 || ||| | |||||| ||||| || || |||||||| ||||| | ||| || | | Sbjct 265122 CAGTACTAGATGTAAGGTAGATTCCTTCTGAATATTATAGTCCGAAAGAGTTCTGC-CAT 265064 Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153 |||| | |||||||| || | || | |||||||||||| || || | ||||| || | Sbjct 265063 CTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTGT 265004 Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213 | ||||| ||| | |||| | ||| || | || || || || | ||| || | Sbjct 265003 CCTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAGGGCTCGACCTCCAAAGTAATGG 264944 Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || ||||| |||||||| ||||| Sbjct 264943 TCTTGCCTGTTAGTGTTTTTACAAAGATCTGCAT 264910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933649061240