Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq129 84.2 3e-11 >seq129 Length=387383 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/277 (67%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668 |||| |||| | |||| | ||| | || ||||||||||| | ||| | ||||| || Sbjct 182297 TATCAATAATCTTATTCAAGTTTCTAGTTACAACCTTTGTTACTTCCTTGAGCTTGTCAA 182356 Query 118669 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728 |||||||| | |||||| || ||| |||| ||||| | || || |||| || | Sbjct 182357 AATCAAAAGTTTTTTTCTCTTTATCAACAAACTTGGGAAGTCCAATGGATGCCAAGTTGC 182416 Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788 | |||| | |||| ||| ||||||||||| || || || | ||| | Sbjct 182417 AGACAGCAATTTCATTTGCGCTAGTATACTCTATAATCTCTGTACAGAGGTTACTAGAAA 182476 Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT--GTTACACGCATCCTTGTAAAGCAT 118846 ||||||||| || || || ||||| ||||| | ||| || |||||||| || Sbjct 182477 CAATGGTGCCTAAATTTTTCTGATT--ACTTTTTTGATTAGCGGCGTCCTTGTAGCAAAT 182534 Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||| || |||| | | ||| ||| Sbjct 182535 ATAGGGAGTCCCCGTTTCTATTTGAGCTTGGAGTATA 182571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434079086200