Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq129 150 2e-31 >seq129 Length=387383 Score = 150 bits (166), Expect = 2e-31 Identities = 684/1071 (64%), Gaps = 55/1071 (5%) Strand=Plus/Minus Query 104896 TATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAA 104955 ||| ||| | |||||| || || || || || || || ||||| |||||| ||| Sbjct 182571 TATACTCCAAGCTCAAATAGAAACGGGGACTCCCTATATTTGCTACAAGGACGCCGCTAA 182512 Query 104956 CCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAT---CTCTGTACAGA 105012 ||||| |||||||| || ||||| || | || ||| | | ||||||||||| Sbjct 182511 TCAAAAAAGTAATCAGAAAAATTTAGGC---ACCATTGTTTCTAGTAACCTCTGTACAGA 182455 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 || | || | ||| | | |||| | ||||| || ||| | ||||| || | || Sbjct 182454 GATTATAGAGTATACTAGCGCAAATGAAATTGCTGTCTGCAACTTGGCATCCATTGGACT 182395 Query 105073 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 105132 ||||||| ||| ||| ||||| ||| || ||||||| ||| || ||| | ||||| || Sbjct 182394 TCCCAAGTTTGTTGATAAAGAGAAAAAAACTTTTGATTTTGACAAGCTCAAGGAAGTAAC 182335 Query 105133 GAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA---GAAATTTTT--ACCCCGTT 105187 || ||| || | |||| | || | ||||||||| | | | || || || | Sbjct 182334 AAAGGTTGTAACTAGAAACTTGAATAAGATTATTGATATTGGCTACTATTCAACTCC--T 182277 Query 105188 GAGACTGCTCGTAAA--TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 || | || ||| || || | | ||| || || | || | |||||||| || | Sbjct 182276 GAAA--GC---AAAAGTTCCAACCTAAAACATCGACCTTTAGGAATTGGTGTTCAAGGAC 182222 Query 105246 TCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCA 105305 | || ||| ||||| | |||| ||| || || || | ||| || |||| | Sbjct 182221 TTGCAGATTGTTTCATGATGCTTCGCTTGCCATACGAGTCTGAGGGAGC-CAGAAAATTA 182163 Query 105306 A----TGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTG 105361 | || | || ||||| | || ||| |||| || | ||||| |||| || || Sbjct 182162 AACGTTGAG---ATTTTTGAATCTATCTATTACGCTGCCTTAGAGGCTAGTTGTGAATTA 182106 Query 105362 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 105421 ||||| ||||| || |||||||||| ||||||||| || |||| | | Sbjct 182105 GCAGAAAAAGATGGACCTTATGAAACCTACTTGGGTTCTCCTGCAAGTAAAGGTATTTTA 182046 Query 105422 CAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-----CTACGACTGGGAAGCTCTCA 105476 |||||||| ||||||| | || | ||| | | ||| | ||| ||||| || | Sbjct 182045 CAATTTGACATGTGGGGA-GTTAAACCTAAC-TCAGGAATTTGCGATTGGGACCTACTTA 181988 Query 105477 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA----TGGCTCCAATGCCA 105532 | || ||| || | || | ||| | |||| | |||| || ||||| Sbjct 181987 AACAAAAGATCTCCAAGCATGGAC----TAAGAAATTCCTTATTATTGGCACCTATGCCC 181932 Query 105533 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAAC 105592 ||||| || ||| | || || ||||| ||||||||| | || || || | ||| | || Sbjct 181931 ACAGCATCTACCTCTCAGATATTGGGAAATAATGAAAGTTTCGAGCCTTTTACGTCAAAT 181872 Query 105593 ATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGAT 105652 || |||| | ||| || | || |||||| | || || || |||||| || || Sbjct 181871 ATTTATCATCGTAGAGTTCTATCCGGCGAGTTTTTCATCGTGAATCCACATCTCCTGAAT 181812 Query 105653 GACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT------ATGAAGGATCTCATGGTGAAA 105706 ||| | ||| | || | ||| || ||| | || || | || | || Sbjct 181811 GACTTGCTCGAGCTAGGATTATGG---AATGATCGTCTCAAACAGAATATAATTGCTAAC 181755 Query 105707 GCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGC 105766 || || ||||||||||| | ||||||| | || || || || || Sbjct 181754 AACGGCAGT---ATTCAAAATATAGATTGTATTCCAGAAGATATACGAAATTTATATAAA 181698 Query 105767 ACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 105826 ||||||||||||||||| ||| || ||||||||||| |||||| | || | | Sbjct 181697 ACAGTTTGGGAAATCAAACAAAAGTCAGTAATTGACATGGCAGCAGATAGAGGACCTTAT 181638 Query 105827 ATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCT 105886 ||| || |||| | ||||| | ||||||| | | | | | ||||| ||| Sbjct 181637 ATTTGCCAGTCTCAATCTCTGAATATACATATGGAAAATGCGAATTTTGCGAAGCTTTCT 181578 Query 105887 TCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 |||||||| | || | ||||| || ||||| || |||||||| |||||| Sbjct 181577 TCTATGCATTTTTATGGCTGGAAAAAAGGTCTTAAGACGGGGATATATTAC 181527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259742839800