Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq144 143 1e-29 >seq144 Length=702637 Score = 143 bits (158), Expect = 1e-29 Identities = 305/445 (69%), Gaps = 9/445 (2%) Strand=Plus/Plus Query 64884 TACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTG 64943 |||| | || || |||||||| | || ||||||| ||||||||| ||||| || ||| Sbjct 647666 TACTCCAACCAGTACCAATACCATCTGTACCATTTACTAAAATCATAGGAATTATAGGTA 647725 Query 64944 CATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAAT-ACTTCAAAATGGCATCA 65002 ||||| | | ||| |||| |||||||||||| |||| | || | ||||| |||| Sbjct 647726 CATAATATAAAGGTTCAATTTGTTGACCATCATCATATAAATAAGTTAATAATGG-ATCA 647784 Query 65003 TCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCG 65062 || ||| |||||||||| | | || |||| ||||| || | ||||| | | | Sbjct 647785 TCTGCTTCTGGAAATATATATCTTGTCCATTTAGACAATTTTGTGAATATATAACGTGCA 647844 Query 65063 GATGCGTG-GTCTTGTCCA-GTTC--GTCGTGTTCCAAACTGACCATTTGGCATTAATAA 65118 | | || |||| ||| ||| || | ||||| |||||| |||| ||||| Sbjct 647845 G-CACTTGCATCTTTACCACCTTCTTTTCTACTACCAAATTGACCACATGGCTGCAATAA 647903 Query 65119 ATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATT-TAAAC 65177 ||| | || || |||| |||||| || ||||| | ||| | | | || |||| Sbjct 647904 ATTTAAGTTATTACTGCCAACAAAATTTTGTGCCATATTTACAATAG-TACTTTGTAAAG 647962 Query 65178 TCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTT 65237 | |||||| ||||||||| | |||||||| ||||| || ||||||||||||| Sbjct 647963 AAGATTCACCATGATGATATGCACTATGTTCAGCAACATAACCTGCTAATTGAGCAACTT 648022 Query 65238 TTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTT 65297 | | ||| | ||| || || ||||| | || | | |||| ||| | | || | || Sbjct 648023 TAAGTTCATTATATAATTTTTTCTTAAAAGTAGCAAATAATACTTTTCTTTGACCAGGTT 648082 Query 65298 TCAATCCATCCATTAAATTAGGAAT 65322 | | ||||| | |||||||||||| Sbjct 648083 TAAGACCATCAAGTAAATTAGGAAT 648107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679583509250