Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028448.1 Length=167467 Score E Sequences producing significant alignments: (Bits) Value seq123 89.7 6e-13 >seq123 Length=148735 Score = 89.7 bits (98), Expect = 6e-13 Identities = 174/252 (69%), Gaps = 9/252 (4%) Strand=Plus/Plus Query 167182 ATGTTTTCTACACAAAGAAACATAAATT---TCATCACCAATACAGATTTGATTACCTTC 167238 ||| || | ||| | ||||| |||| || ||||||||||| | ||||| | ||| Sbjct 29606 ATGATTACGACAAACAGAAATATAATTTGATTCATCACCAATTAAAATTTGTTCTCCTGT 29665 Query 167239 TTTAACTGGTGTTCCATCTTCCATTAAT-CGAGCTGTCATAATAGCTTTTTTACCACAAT 167297 ||| ||| | |||| || || ||| | |||||| ||||||| |||||||||| Sbjct 29666 AGAAACAGGTTTGCCATATTT-ATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAAT 29724 Query 167298 GACAAACTGCCTTTAGTTCAATAAGTTTATCTGCAATCGCCAAAAGTTCTTTAGAACCTT 167357 ||| | || |||| ||||||||||||||| || || | ||| | ||| || Sbjct 29725 AACATATTGTTTTTATTTCAATAAGTTTATCAGCCCATGCAAGAAGATATTTGCTTCCAG 29784 Query 167358 CAAATAATTTTCCAGCGAAATCAGTCCTTAGTCCATAAGCCATA--ACAGGAACATTATA 167415 ||| |||||||| ||||| || |||| || ||| |||| ||||||| ||| Sbjct 29785 AAAACAATTTTCCTTGAAAATCTGTTCTTAAACCGTAA--CATAACACAGGAATATTTAG 29842 Query 167416 TGTATCAACAAT 167427 |||||||||| Sbjct 29843 CTTATCAACAAT 29854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535765428923400