Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq120 158 1e-33 seq130 138 1e-27 >seq120 Length=60016 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || || ||| ||||||| | ||||| ||||| || Sbjct 31638 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31697 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| || ||||| || || || |||||| Sbjct 31698 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31757 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||||| || || |||||||||||||| || || | || ||||| || Sbjct 31758 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31817 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || |||||||| ||||| ||| | | ||||| || Sbjct 31818 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTAT 31867 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || || ||| ||||||| | ||||| ||||| || Sbjct 31866 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 31925 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| || ||||| || || || |||||| Sbjct 31926 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31985 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||||| || || |||||||||||||| || || | || ||||| || Sbjct 31986 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32045 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || |||||||| ||||| ||| | | ||||| || Sbjct 32046 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTAT 32095 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || || ||| ||||||| | ||||| ||||| || Sbjct 32094 ATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACTATTACATTAGAAGTAGAACCATCA 32153 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| || ||||| || || || |||||| Sbjct 32154 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 32213 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||||| || || |||||||||||||| || || | || ||||| || Sbjct 32214 CAACGTTTAATATTTGCAGGAAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 32273 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || ||||||||||| ||||| | | ||||| || Sbjct 32274 ATTCAGAAAGAATCCACTTTACATTTGGTCCTGCGTCTTAGAGGTGGTAT 32323 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || || |||| || | || |||||||| || Sbjct 31410 ATGCAAATTTTTGTTAAGACACTTACAGGGAAAACTATCACATTAGAGGTGGAACCATCA 31469 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||| || ||||| || || || |||||| Sbjct 31470 GATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 31529 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||||| || || |||||||||||||| || || | || ||||| || Sbjct 31530 CAACGTTTAATATTTGCAGGGAAACAATTGGAAGATGGTCGTACTTTATCTGATTATAAT 31589 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || |||||||| ||||| ||| | | ||||| || Sbjct 31590 ATTCAGAAAGAATCTACTTTACATTTAGTTTTACGTCTTAGAGGTGGTAT 31639 >seq130 Length=374773 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || |||||| | |||||| | || || || || || Sbjct 264910 ATGCAGATCTTTGTAAAAACACTAACAGGCAAGACCATTACTTTGGAGGTCGAGCCCTCT 264969 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||||| ||||| || || || || || |||||| Sbjct 264970 GATACTATTGAAAATGTCAAAGCTAAGATTCAGGACAAGGAGGGAATTCCTCCTGATCAA 265029 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | || || |||||||||||||| | || |||| || || || Sbjct 265030 CAGCGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACTCTTTCGGACTATAAT 265089 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| ||||| || ||||||||| Sbjct 265090 ATTCAGAAGGAATCTACCTTACAT 265113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917611710400