Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq123 86.0 7e-12 >seq123 Length=148735 Score = 86.0 bits (94), Expect = 7e-12 Identities = 213/318 (67%), Gaps = 9/318 (3%) Strand=Plus/Minus Query 105922 ATTCATTGCGTATTTGTAGATGAAGCTCAGTTTTTAAAAACTGAACAGGCGCATCAATTG 105981 ||| |||| ||| || |||||||| ||| ||||||| || || || | | || Sbjct 29920 ATTGATTGTGTACTTATAGATGAATGTCAATTTTTAACAAAAGATCAAGTTAAACATACA 29861 Query 105982 AGCCGAATTGTTGATACATATAATGTTCCTGT--TATGGCTTATGGGCTAAGGACTGATT 106039 | |||||||||| ||| ||||||| |||| ||| || |||| || |||| Sbjct 29860 TGTATTATTGTTGATAAGCTAAATATTCCTGTGTTATG--TTACGGTTTAAGAACAGATT 29803 Query 106040 TCGCTGGAAAATTATTTGAAGGTTCTAAAGAACTTTTAGCGATTGCAGATAAACTTATTG 106099 | |||||||| ||| || ||| | ||| | || || ||||||||||||| Sbjct 29802 TTCAAGGAAAATTGTTTTCTGGAAGCAAATATCTTCTTGCATGGGCTGATAAACTTATTG 29743 Query 106100 AACTAAAGGCAGTTTGTCATTGTGGTAAAAAAGCGATTATGACAGCTCG-ATTAATGGAA 106158 || |||| || | ||| |||||||||| ||||| | |||||| | ||| || || Sbjct 29742 AAATAAAAACAATATGTTATTGTGGTAAGAAAGCTACAATGACATTAAGAATTGAT-AAA 29684 Query 106159 GATGGATCACCAGTTAAAGAAGGTAATCAAATCTGTATTGGTGATGA---AATTTATGTT 106215 |||| ||| ||| ||| | ||||| | ||||||||||| || |||| || Sbjct 29683 TATGGCAAACCTGTTTCTACAGGAGAACAAATTTTAATTGGTGATGAATCAAATTATATT 29624 Query 106216 TCTTTGTGTAGAAAACAT 106233 ||| | ||| | || ||| Sbjct 29623 TCTGTTTGTCGTAATCAT 29606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534667830912800