Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028820.1 Length=162101 Score E Sequences producing significant alignments: (Bits) Value seq123 98.7 1e-15 >seq123 Length=148735 Score = 98.7 bits (108), Expect = 1e-15 Identities = 175/251 (70%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 55719 AACAGCATTTCCATTGATATCAATACGAGCTACCATTGTAGCTTTCTTACCACAATGACA 55778 ||||| || |||| ||||||| | | ||||||||||||||||||||||| ||| Sbjct 29669 AACAGGTTTGCCATATTTATCAATTCTTAATGTCATTGTAGCTTTCTTACCACAATAACA 29728 Query 55779 TACACCTTTTAGTTCAACCAATTTATCAGCGCATTGCAA-TAGTGCTTTAGATCCCGGGA 55837 || ||||| ||||| | ||||||||| || ||||| || ||| ||| | | Sbjct 29729 TATTGTTTTTATTTCAATAAGTTTATCAGCCCA-TGCAAGAAGATATTTGCTTCCAGAAA 29787 Query 55838 ATAATTCTCCTCTGAAATCTGTTCTTAGTCCATATGCCATA--ACAGGAACATTGTAAAT 55895 | |||| |||| ||||||||||||| || || |||| ||||||| ||| | Sbjct 29788 ACAATTTTCCTTGAAAATCTGTTCTTAAACCGTA--ACATAACACAGGAATATTTAGCTT 29845 Query 55896 ATCTACGATTTTACACAAGTCTTGTACTTGAGCCGGTTCTAAAAATTGTGCTTCATCAAT 55955 ||| || || |||| | || |||||| | | ||||||||| |||||| || Sbjct 29846 ATCAACAATAATACATGTATGTTTAACTTGATCTTTTGTTAAAAATTGACATTCATCTAT 29905 Query 55956 CAGTACACAAT 55966 |||||||||| Sbjct 29906 AAGTACACAAT 29916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518594260046200