Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq136 129 7e-25 >seq136 Length=367210 Score = 129 bits (142), Expect = 7e-25 Identities = 187/264 (71%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 136378 CATCAGGAAAGGGAATACTTGCTGTTGATGAATCTACAAATACTTGTGGGAAAAGATTGG 136437 || |||| || |||||| | |||| |||||||||||| ||| | ||||||||| | Sbjct 263023 CACCAGGTAAAGGAATATTAGCTGCAGATGAATCTACAGGTACAATTAAGAAAAGATTTG 263082 Query 136438 CTAGTATTGGAGTAGAAAATACAGAGGCAAATAGACAGGCATACAGAGGTATGTTATTTA 136497 | ||||||| || ||||| || ||||||| ||||| | | | ||||||| Sbjct 263083 ATCAAGTTGGAGTCGAGAATACTGAACAAAATAGAGCAGCATATCGCGAATTATTATTTA 263142 Query 136498 CCACAGAGGGATTAGGTAATTATATTAGTGGTGCTATCTTATTTGAAGAAACACTATTTC 136557 || || || ||||| || || ||| |||| ||| |||| |||||||||| |||||| Sbjct 263143 AGACTGAAGGTTTAGGAAAATACATTTCAGGTGTTATTTTATATGAAGAAACATTATTTC 263202 Query 136558 AAGATCATGCTGATGGAGAAAGCATGATTGCAAAGTTAGAGAAGCAAGGAATTATACCAG 136617 || | |||| ||| |||| ||||||| ||| || ||||||||| | ||| Sbjct 263203 AAACTACTGCTAGTGGTGAAAAAATGATTGATTTATTAACTAAACAAGGAATTCTTGCAG 263262 Query 136618 GTATCAAGGTAGATAAAGGATTAA 136641 | || ||||| |||| ||||||| Sbjct 263263 GAATTAAGGTTGATATGGGATTAA 263286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631426055538200