Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq93 82.4 6e-11 >seq93 Length=13655 Score = 82.4 bits (90), Expect = 6e-11 Identities = 242/363 (67%), Gaps = 14/363 (4%) Strand=Plus/Plus Query 125975 TTCTAAATCTTCATAATTAATATCAAAAAT-TGATTTAT--CTGTATTAATTTTTAATTG 126031 ||| | |||||| | |||| ||| ||| |||| ||| || | |||| | ||||||| Sbjct 4067 TTCAATATCTTCCCATTTAAAATCTTCAATATGATCTATTTCTCTTTTAAATCTTAATTG 4126 Query 126032 AGG---TGGTAGATAACTATCTCTTGATAATTGTGTATGTATTGCATCCATATGATTGGA 126088 ||| |||| | | | | || || || | || || || ||| | |||||| Sbjct 4127 AGGAAATGGTCTAGGAAGACGTTTTAATTGTTCTTTAAGT--TG-ATCAAGATGATTTTC 4183 Query 126089 ATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTT 126148 ||||||||| ||||| |||| | ||| | |||||| || | ||||| ||| Sbjct 4184 ATAAATATGAGCATCACCAATAAAAATAATTAGTTCACCAGGCTTATAACCACAAACTTG 4243 Query 126149 TGC-AACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATA 126207 ||| |||| || | | | |||||| ||||||||| || ||| |||||| || Sbjct 4244 TGCTAACATCATACATAAC-ATTGCATAAGATGCAATATTAAATGGAGATCCTAAACCTA 4302 Query 126208 TATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTC-TTGT--ACGTAAAATT 126264 |||| ||||||||||||||| | || |||| || || || | |||||| ||| Sbjct 4303 AATCACAACTTCTTTGATATAAAGTAGAACATAATCTATTTTCATTATCAACGTAATATT 4362 Query 126265 GAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTG 126324 || | | || || ||||||||||||||| | | | ||| |||||||| |||| Sbjct 4363 GAGATAAGACATGACATGGTGGTAATGCCATTTGAGATAATGCAGATGGATTCCAAGCTG 4422 Query 126325 AAA 126327 || Sbjct 4423 TAA 4425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408597677930015