Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq120 87.8 1e-12 >seq120 Length=60016 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| || ||||| |||||||| |||||||| ||||| | | ||| ||||||| Sbjct 32302 ACCAAATGTAAAGTGGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCC 32243 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 |||||||| || ||| |||| | | |||||| || || | ||||| || || | Sbjct 32242 AATTGTTTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGA 32183 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTT 101207 |||||| ||| |||| | | || |||| | ||| | ||| | |||||||| | Sbjct 32182 ATTTTTGCTTTAACATTTTCAATTGTATCTGATG--GTTCTACTTCTAATGTAATAGTCT 32125 Query 101208 TGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | || || | || |||| |||||||||||| Sbjct 32124 TTCCTGTAAGAGTCTTAACAAAAATTTGCAT 32094 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || ||||| |||||||| |||||||| ||||| | | ||| ||||||||||||| Sbjct 31840 TGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCCAATTGT 31781 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| |||| | | |||||| || || | ||||| || || ||||||| Sbjct 31780 TTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTT 31721 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTTTGCCCG 101213 ||| |||| | | || |||| | ||| | ||| | |||||||| || || | Sbjct 31720 GCTTTAACATTTTCAATTGTATCTGATG--GTTCTACTTCTAATGTAATAGTCTTTCCTG 31663 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | || |||| |||||||||||| Sbjct 31662 TAAGAGTCTTAACAAAAATTTGCAT 31638 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || ||||| |||||||| |||||||| ||||| | | ||| ||||||||||||| Sbjct 32068 TGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCCAATTGT 32009 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| |||| | | |||||| || || | ||||| || || ||||||| Sbjct 32008 TTTCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTT 31949 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTTTTGCCCG 101213 ||| |||| | | || |||| | ||| | ||| | |||||||| || || | Sbjct 31948 GCTTTAACATTTTCAATTGTATCTGATG--GTTCTACTTCTAATGTAATAGTCTTTCCTG 31891 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | || |||| |||||||||||| Sbjct 31890 TAAGAGTCTTAACAAAAATTTGCAT 31866 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/226 (69%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || ||||| |||||||| |||||||| ||||| | | ||| ||||||||||||| Sbjct 31612 TGTAAAGTAGATTCTTTCTGAATATTATAATCAGATAAAGTACGACCATCTTCCAATTGT 31553 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| |||| | | |||||| || || | ||||| || || ||||||| Sbjct 31552 TTCCCTGCAAATATTAAACGTTGTTGATCAGGAGGAATACCTTCCTTATCTTGAATTTTT 31493 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213 ||| |||| | | || |||| | ||| || | || |||||||| || | Sbjct 31492 GCTTTAACATTTTCAATTGTATCTGATG--GTTCCACCTCTAATGTGATAGTTTTCCCTG 31435 Query 101214 TCAATGTTTTAATAAAAATTTGCATTATTACAATATATTTTTTACT 101259 | | ||| |||| |||||||||||| || |||| | || ||||| Sbjct 31434 TAAGTGTCTTAACAAAAATTTGCATCCTT--AATAAAATTATTACT 31391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660076052555