Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq141 275 7e-69 >seq141 Length=88262 Score = 275 bits (304), Expect = 7e-69 Identities = 573/841 (68%), Gaps = 33/841 (4%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 |||||||||| |||||||||| ||||| | | |||| |||||||| || ||||| | Sbjct 19847 CATAACACCCGCCATTTGATATTCACCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTG 19906 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 | || || ||||| ||||||| ||||||| | ||| |||| || | || Sbjct 19907 AAGAGAAATCAAATCCATCCAATCAAAAGGATTAGTAACATTGTATATTT-TTGAAATAT 19965 Query 23325 TAATTCCTT-TAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATC-ATAG 23382 || | ||| | ||||| |||||||||||||||||||| ||| || || | | Sbjct 19966 CAAGAGCAACTAATAATCTATCAGCTACAAATTCAATATATTGTGTCAT-AAGTCTAGAA 20024 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||| || || | ||| || | | |||| |||| || | |||||| |||| Sbjct 20025 TTCATACCAATAAGATCTACAGGTAAAGAATCACATAAAAAGTTTCTTTCAACATCAACA 20084 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGG--TGGATATTTTAAAT------ 23494 || ||| || ||||| || | | |||| | | || ||||||| Sbjct 20085 GCTTCTGATATAATTTG---------TTGTACTCTAGAAATTGGTAATTTAAATTTAAGT 20135 Query 23495 -ACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCA 23553 | ||| | | |||||| |||||||| ||||| |||||||| | |||||| |||||| Sbjct 20136 GATTTATAAATTAAACAAGCAAAATCTGCATGTAAACCTTCATCACGACTAATTAATTCA 20195 Query 23554 TTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAAT 23613 ||||||||||| | || ||||||||||| |||||||| | ||||||||| ||| || Sbjct 20196 TTAGAAAATGTAAGACCAGGCATTAATCCACGTTTTTTTAACCAAAATATAGCACAGAAA 20255 Query 23614 GATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTT 23673 || ||||| |||||||| ||||| || || | | | | | | |||||| Sbjct 20256 CTACCAGAAAATAAAATACCTTCAACTGCACAGAATCCAATTAATCTTTCAGCAAATGAA 20315 Query 23674 GCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAAT- 23732 || || || ||||||||| ||| ||| | || || ||| || |||| Sbjct 20316 CGATCATTATTC---ATCCATTTTGTTGCCCATTCTGCTTTTTTTTTAACTGCATCAACA 20372 Query 23733 TGTTTCAATTGCTTTTAAGAGAAAAGTTTT--TTCTTCATTATCTGTTATATATGTATCA 23790 || | | | |||| || | | | || ||| | | |||| |||||||| ||| Sbjct 20373 TGAGTTA-TAGCTTCAAATA--ACATTTGACGTTCCTTAATATCACTTATATATTGATCT 20429 Query 23791 ATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850 || ||||| ||| ||||| || || | ||||||||| || ||||| ||||| | Sbjct 20430 ATAAGTAATGAATAAGTTTCATTGTGTATTTGTTCAATAGCCATTTGAAATGCATAATAC 20489 Query 23851 CATCTAGCTTCAGACAATTGAACATCA-TTAAAAAATCTTTTAGCTAAATTTTCGTTAAC 23909 ||| ||||||| | ||| | || ||||||||| || ||| | |||||| |||| Sbjct 20490 ATTCTTGCTTCAGTAATTTGTATTTCTCTTAAAAAAT-TTACAGCAAGATTTTCCATAAC 20548 Query 23910 AATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGT 23969 ||| |||||||| |||||||| || |||||||||||||| ||||||||| ||||| | Sbjct 20549 AATTCCATCACTTGCAGCAAAAAATGCAAGAACATATTTAATAAAATGTTTTTCAGGATC 20608 Query 23970 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | ||| || |||||| | || |||| |||||||| ||| ||| || |||||| Sbjct 20609 TTTTAAACTTCCCCAATCTCTCATGTCTTGACTTAAATCAATTTCTTCAGCTACCCAAAA 20668 Query 24030 A 24030 | Sbjct 20669 A 20669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487054803000