Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F000804495.1_202014-12- 18] 78 sequences; 9,054,010 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq25 352 2e-91 seq10 262 3e-64 seq23 242 2e-58 seq22 152 3e-31 seq1 150 1e-30 seq4 141 6e-28 seq8 132 3e-25 seq3 105 4e-17 >seq25 Length=151609 Score = 352 bits (390), Expect = 2e-91 Identities = 669/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Minus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 82930 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 82871 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| || || ||||| Sbjct 82870 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTA 82811 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATC---TGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | || ||| || ||||| ||| |||||| Sbjct 82810 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGA 82751 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 82750 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 82691 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | ||| || ||||||||| | || | || || | | Sbjct 82690 ATTGAGTTAGATTCACTCTATGAGGGTATTGATTATTCAGTTGCCATCAGTAGAGCCAGA 82631 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 82630 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 82571 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 82570 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 82511 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 82510 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 82453 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 82452 AAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 82393 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 82392 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 82342 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 82341 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 82282 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 82281 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGT 82223 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 82222 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 82163 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| ||| Sbjct 82162 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACT 82103 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| ||||||| | | ||| Sbjct 82102 TTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTGGTAAG 82043 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 82042 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 81983 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 81982 ATGGTTAATGATGC 81969 Score = 280 bits (310), Expect = 1e-69 Identities = 394/551 (72%), Gaps = 3/551 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 83524 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 83465 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | |||||| Sbjct 83464 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACT 83405 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| ||||| | || Sbjct 83404 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAAC 83345 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 83344 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 83285 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | ||| ||| || Sbjct 83284 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAGT 83225 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 83224 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 83165 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||| | | |||| | || | || | | |||| ||| || Sbjct 83164 CAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTGTAGTT 83105 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || |||||||||||||| || ||||| || |||| Sbjct 83104 ACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTGCAATT 83045 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 83044 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 82985 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 82984 CTTGATAAGAA 82974 >seq10 Length=159651 Score = 262 bits (290), Expect = 3e-64 Identities = 687/1029 (67%), Gaps = 63/1029 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 46777 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 46836 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 46837 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 46888 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || ||||| || |||| |||| ||| || Sbjct 46889 CTAATGGTAGATTTACTGAACCTGTTAGTGATTTAAAAGGAATATGGTTTAAAGATTCTG 46948 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 46949 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 47005 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 47006 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 47064 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 47065 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 47118 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 47119 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 47176 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 47177 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 47236 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAG--- 297217 || ||| || ||| | | || | ||||||||| |||||||||||||| Sbjct 47237 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 47296 Query 297218 --------AATTTTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCA 297269 ||||| | || ||| | ||||||||| ||||| | || |||||| | Sbjct 47297 TAGCATCAAATTTAAAAGA--TGAAGAAATTAATGATATACATCGTCATTTTATTGATTA 47354 Query 297270 AATAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGT 297323 || |||||||| || | |||||| | || ||| | || | || Sbjct 47355 TATTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGT 47414 Query 297324 TTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGA 297383 ||| ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| Sbjct 47415 TTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCTATTAATTATCCATTTGA 47474 Query 297384 AAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAAT 297443 |||| ||| | || | | | | ||| | |||||||||| | ||| | Sbjct 47475 AAATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTT 47528 Query 297444 TGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAA 297503 |||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | | Sbjct 47529 AGATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCA 47588 Query 297504 ACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAAT 297563 |||||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||| Sbjct 47589 ACCAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAAT 47648 Query 297564 GTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGC 297620 ||||||||| |||| ||||||||||||||| | || ||| | ||||||||||||| Sbjct 47649 GTCAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGC 47705 Query 297621 AGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAA 297678 |||| ||||| | |||||| | || || |||| || |||| ||| ||| | | | | Sbjct 47706 AGATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGA 47763 Query 297679 TTTGATGAA 297687 ||| | ||| Sbjct 47764 TTTAAAGAA 47772 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 45946 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 46003 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 46004 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 46063 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 46064 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 46116 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 46117 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 46176 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 46177 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 46236 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 |||||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 46237 ATTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 46296 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| || | | ||| | || ||||| ||| ||||| ||| Sbjct 46297 GTATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 46356 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 46357 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 46416 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 46417 AATGATCCATCTGT 46430 >seq23 Length=679202 Score = 242 bits (268), Expect = 2e-58 Identities = 395/559 (71%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 598197 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 598138 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 598137 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 598078 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 598077 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 598020 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 || | || || | || ||| | ||||||||| |||| | ||| |||||||| | Sbjct 598019 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 597960 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA 474629 ||| | | | || | | || | || || | | | || || || ||| ||| Sbjct 597959 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGT-- 597902 Query 474630 TACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | | ||||| | || ||||| | || ||| | |||| | ||||| || Sbjct 597901 TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGTCTTGCT 597842 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||| |||||| ||| || ||| | ||||| || | ||||||| |||||||||||| Sbjct 597841 CAAGATGAAAGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTA 597783 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| || ||||||||| |||| ||||| || || || ||||| || |||| Sbjct 597782 CTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTG 597723 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| |||| Sbjct 597722 CTGGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTT 597663 Query 474867 TTGATAAGAATTCTGACAA 474885 | |||||||| |||| || Sbjct 597662 TGGATAAGAAAGCTGAGAA 597644 Score = 140 bits (154), Expect = 2e-27 Identities = 260/380 (68%), Gaps = 9/380 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 597132 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 597073 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || | | | || ||||| | |||| ||||| | | |||||| || Sbjct 597072 GGAGGT-AGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTATT 597022 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||| Sbjct 597021 GAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAG 596962 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || |||| || ||||| |||||||| || ||||| ||||| | | | Sbjct 596961 AAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTTAT 596902 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || ||||| | | | ||||| ||||| ||| || |||| || | ||| || Sbjct 596901 GAGGGTGAGCGTCCAATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGA 596842 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | || Sbjct 596841 ATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGAT 596782 Query 476153 GGTATTCTTAATGTTACTGC 476172 |||||| | | |||| ||| Sbjct 596781 GGTATTTTACAAGTTAGTGC 596762 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 134812 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 134753 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 134752 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 134693 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 134692 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 134636 >seq22 Length=60999 Score = 152 bits (168), Expect = 3e-31 Identities = 276/398 (69%), Gaps = 18/398 (5%) Strand=Plus/Plus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 47444 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 47501 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 47502 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 47551 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATG 475968 ||||||| | || || || | ||| | ||| |||||||||| | || |||| Sbjct 47552 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 47611 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 |||| | | || ||||| |||||| | | || |||||||| || || || | Sbjct 47612 AAAAAGAGCCAA-GTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGT 47670 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTT 476086 || |||| |||||| |||| || |||||||| |||||| ||| ||| | Sbjct 47671 TTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGAT 47730 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| || |||||||| ||||||||||||||||| || |||||||||||| Sbjct 47731 G--GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGAT 47788 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||| ||| | |||||| ||| |||||| || Sbjct 47789 GCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 47826 Score = 123 bits (136), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 46722 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 46780 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 46781 GTTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 46840 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| Sbjct 46841 TCTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCA 46900 Query 474860 TATGG 474864 || || Sbjct 46901 TACGG 46905 >seq1 Length=592092 Score = 150 bits (166), Expect = 1e-30 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| Sbjct 329341 TAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTAAGATCTACAA 329400 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | | |||||| ||||| || |||| ||||||| |||| | | Sbjct 329401 TCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 329460 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||||| |||| |||||||| || |||||||||||| | |||| ||| Sbjct 329461 ATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 329506 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 503205 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 503262 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 503263 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 503322 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 503323 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 503382 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 503383 AGTCTTAACGAAAATCTG 503400 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 503661 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 503718 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 503719 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 503778 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 503779 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 503838 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 503839 AGTCTTAACAAAAATCTG 503856 Score = 105 bits (116), Expect = 4e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 503453 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 503512 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 503513 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 503572 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | |||||| || ||||| || Sbjct 503573 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGACAAAAATCTG 503628 >seq4 Length=383362 Score = 141 bits (156), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Plus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || |||||| || Sbjct 169414 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 169473 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 169474 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 169531 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||||||| Sbjct 169532 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 169591 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 | |||||| || || | ||| |||||||||||||| || ||| | ||||| Sbjct 169592 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 169648 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACTGT 355542 || |||||||||||| ||||||| ||||| || | ||||| | || | ||| | Sbjct 169649 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGT-AATGATGAT 169707 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 |||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 169708 TCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA-- 169765 Query 355603 TCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTA 355662 ||| |||| || || || || || | | |||||||||||| ||||| Sbjct 169766 -GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTT 169824 Query 355663 AGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAA 355720 | ||| || || || || || ||||| || |||| ||| ||| |||| | | || Sbjct 169825 AAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAA 169882 Query 355721 GTTCGCGATGAATAAAATCATAATAT 355746 |||| ||||||||||||| ||||| Sbjct 169883 GTTCTTTATGAATAAAATCAAAATAT 169908 >seq8 Length=435824 Score = 132 bits (146), Expect = 3e-25 Identities = 280/404 (69%), Gaps = 24/404 (6%) Strand=Plus/Minus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 287664 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 287606 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 287605 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 287547 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 287546 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 287489 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || ||||| || | | | Sbjct 287488 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCGCCCTCCAAT 287434 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | |||||||||||| || || ||||| |||||||| Sbjct 287433 CCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGCCAATTGTCATACGC 287374 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 287373 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 287314 Query 269464 ATATCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 ||||| ||| | || || ||| | || | |||||| ||||| Sbjct 287313 ATATC--CTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTG 287273 >seq3 Length=673267 Score = 105 bits (116), Expect = 4e-17 Identities = 327/501 (65%), Gaps = 24/501 (5%) Strand=Plus/Minus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATTAATAAC-AG 894904 |||| |||| |||||||| || ||||| |||||||| ||| ||||| || | Sbjct 58093 TTATGATGGATTTGAACCTTCAGGAAGAATGCATATTGCTCAATGTATATTAAAGACTAT 58034 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | || | || | || |||| Sbjct 58033 TAATGTAAATAAGTTAACTGAAT----GTGGATGCGTTTTTGTATTCTACGTAGCAGATT 57978 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| ||||||||| ||||| || ||| ||| Sbjct 57977 GGTTTGCTCTACTCAATAATAAGATGGGCGGTGATCTTGAAAAAATCAAGATTGTTGGTG 57918 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 ||||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 57917 AATATTTCGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 57858 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || |||| Sbjct 57857 GGGCATCTGATTTTATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATA 57798 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 57797 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 57740 Query 895200 AGACGGAGATGAATTATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATAT 895259 ||| |||||| | | | || | | ||||||| ||||||||| || ||||| Sbjct 57739 AGAAAATGATGAACAACCATGTGCTTCAGTATTTTATCCATGCATGCAATGCGCTGATAT 57680 Query 895260 TTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGT 895319 || ||||| |||| ||||||||| || |||||| | |||||| | ||||| Sbjct 57679 ATTCCAACTC-------AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGT 57629 Query 895320 TAATATGCTCGCTCTCGAATA 895340 ||| ||||| ||| ||||| Sbjct 57628 TAACATGCTTGCTAGAGAATA 57608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268175854201544