Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 2e-11 >seq10 Length=196662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 50612 CATTGTTGCTTTCTTGCCACAATGACAAATACCCTTCATTTCGACCAGTTTATCAGCAAA 50671 ||| || ||||| |||||||| |||||||| || ||||| ||||||||||| | Sbjct 175564 CATGGTAGCTTTTTTGCCACAGCGACAAATAGTTTTGATTTCAGTAAGTTTATCAGCCCA 175623 Query 50672 TGCCATTAATGCCGCAGATCCTTCAAATAGATTGCCCTGAAAGTCAGTGCGAAGGCCATA 50731 ||| | ||| | ||||||||||| ||| ||| |||||| || | | ||||| Sbjct 175624 TGCTAATAAGTATTTACTTCCTTCAAATAAATTTCCCCTAAAGTCTGTTCTCAAACCATA 175683 Query 50732 GCACAGTACAGGGATAT-TAGCATCATCAACAA 50763 ||| ||||| || |||| |||| | |||||||| Sbjct 175684 GCATAGTACTGGAATATCTAGC-TTATCAACAA 175715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532409480207840