Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq13 271 3e-67 seq1 181 4e-40 seq7 152 2e-31 seq4 150 7e-31 seq9 145 3e-29 seq11 111 6e-19 seq15 87.8 7e-12 seq3 87.8 7e-12 >seq13 Length=100921 Score = 271 bits (300), Expect = 3e-67 Identities = 496/715 (69%), Gaps = 16/715 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 2308 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 2367 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 2368 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 2427 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | |||| | || Sbjct 2428 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAA 2485 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 2486 AACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 2545 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 2546 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCA-ATCAT 2604 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 2605 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 2664 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| |||| | ||| ||| |||| || || | ||| |||| Sbjct 2665 T-TTACAAAAGATGAAGGAAATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAATGCT 2722 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| Sbjct 2723 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGT 2782 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 2783 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 2842 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 2843 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 2899 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 2900 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 2959 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||| |||||||||||| | || ||||||||| ||||||| | | ||||||| Sbjct 2960 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAAT 3014 >seq1 Length=1295931 Score = 181 bits (200), Expect = 4e-40 Identities = 458/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 85498 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 85557 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 85558 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 85617 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 85618 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 85675 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | || | || | | ||||| ||| | | | |||||| |||| ||||| | Sbjct 85676 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 85735 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || || | | ||||| || || ||||| Sbjct 85736 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 85795 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| |||| ||||||| ||| || Sbjct 85796 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGT-CTTGCTC 85854 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| || || ||| | ||| ||| | |||||||||||||| Sbjct 85855 AAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTACT 85914 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || ||||||| Sbjct 85915 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCT 85974 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| | || ||||||||||| || |||||||| || | || | ||| | Sbjct 85975 GGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 86034 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| || || || | |||||||||| ||||| ||||| || ||| Sbjct 86035 G-------ATAAGAA--AGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 86085 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 86086 TTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACAAGTGGT 86145 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 86146 GATACCCATTTGGGAGGTGAGGATTTCGAT 86175 Score = 116 bits (128), Expect = 1e-20 Identities = 350/536 (65%), Gaps = 27/536 (5%) Strand=Plus/Plus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT---- 451950 ||||| || || | ||||| |||||||| || || ||||| ||||||| || | Sbjct 86467 GATGAGATCGTTTTGGTAGGTGGTTCTACTCGTATCCCTAAGATTCAAGCCTTGATCAAG 86526 Query 451951 GTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAAT---CCTGATGAAGCTGT 452007 | ||||| || ||||| | | | || || | || | || |||||||| || Sbjct 86527 GAGTTCTT----TGATGGAAAGGAGCCA---AACAGAGGAATTAACCCAGATGAAGCCGT 86579 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGG 452067 || ||||||||||| || ||||| | ||| || ||||| || || | | | Sbjct 86580 CGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAAG--GAGGTA-------G 86630 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || ||| || || | || |||| || | ||||||| | Sbjct 86631 TGATTTATTATTATTGGATGTTACTCCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGT 86690 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 ||||| || | ||| || ||| | |||| || ||||| ||| || || Sbjct 86691 TATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAGAAGAGCCAAGTTTTCAG 86750 Query 452188 TAC--AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| | ||| ||||| || |||| |||| ||| || || | ||| || || ||| || Sbjct 86751 TACTTACCAA--GATAATCAGCCAGCTGTACTTATCCAGGTTTATGAGGGTGAGCGTCCA 86808 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 ||||| ||||| || || ||| |||| ||||| || || || ||| Sbjct 86809 ATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCA 86868 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || ||| |||||||| |||| | ||| ||||| | |||||||| | | || Sbjct 86869 AGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGATGGTATTTTACAAGTT 86928 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 |||||| || || |||| ||||| || || ||||| || || |||||||| Sbjct 86929 AGTGCAAAGGATAAGGGTACTGGTAAATCCGAGAAGATTACTATCACAAATGATAA 86984 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 560364 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 560305 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 560304 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 560245 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 560244 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 560185 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||| ||||| ||||| Sbjct 560184 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTGAGACTTAGAGG 560141 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 909885 TTCCAAATCTGCCACTTCTTCCAATTCGATGAATATATAATTCTTTATTAATAGGTAGAT 909826 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 909825 CGTAGTTTACAACTAAATTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 909766 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 909765 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 909716 >seq7 Length=879027 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 571273 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 571332 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 571333 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 571392 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 571393 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 571452 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 571453 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 571496 Score = 143 bits (158), Expect = 1e-28 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 ||||| || |||| || || ||||| ||| | || |||||| | || |||| ||||| Sbjct 569561 GTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCAGATACAATTGAG 569620 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | |||| ||| ||||| |||||||||||||| || ||||||||||||||||| || Sbjct 569621 AATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATC 569680 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 || |||| |||||| | || ||||| |||||| | | ||||| || ||| | || || Sbjct 569681 TTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAG 569740 Query 391242 GCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 | || | |||||||| || ||||| ||||| Sbjct 569741 TCCACTTTACACTTAGTCTTGAGACTTAGAGG 569772 Score = 143 bits (158), Expect = 1e-28 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 ||||| || |||| || || ||||| ||| | || |||||| | || |||| ||||| Sbjct 570478 GTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCAGATACAATTGAG 570537 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | |||| ||| ||||| |||||||||||||| || ||||||||||||||||| || Sbjct 570538 AATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATC 570597 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 || |||| |||||| | || ||||| |||||| | | ||||| || ||| | || || Sbjct 570598 TTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAG 570657 Query 391242 GCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 | || | |||||||| || ||||| ||||| Sbjct 570658 TCCACTTTACACTTAGTCTTGAGACTTAGAGG 570689 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 569777 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 569836 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 569837 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 569896 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 569897 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 569956 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 569957 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 570000 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 570694 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 570753 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 570754 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 570813 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 570814 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 570873 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 570874 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 570917 Score = 131 bits (144), Expect = 7e-25 Identities = 128/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 570005 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 570064 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 570065 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 570124 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 |||||||| || || |||| |||||| | || ||||| |||||| Sbjct 570125 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACT 570169 >seq4 Length=1032896 Score = 150 bits (166), Expect = 7e-31 Identities = 231/329 (70%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 783485 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 783426 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 783425 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 783366 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 783365 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCATACGGAAT- 783307 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 783306 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 783255 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 783254 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 783195 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| |||||||| ||||| |||| Sbjct 783194 AACACTTCCCTAGGAGGAGAAGACTTTGA 783166 Score = 95.1 bits (104), Expect = 5e-14 Identities = 269/409 (66%), Gaps = 22/409 (5%) Strand=Plus/Minus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 782771 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 782714 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 782713 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 782664 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 ||||||| |||||| | | ||| |||||||| || || | || || | Sbjct 782663 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 782604 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || || || ||| | || || || || || Sbjct 782603 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTA---AA 782547 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | |||||||| || ||| ||||| | | Sbjct 782546 GTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATG 782487 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | || ||||||| || || || ||||||||||||| | |||| |||| ||| Sbjct 782486 ATGGGAA--TTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 782429 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| ||||| |||| || ||| ||||||| Sbjct 782428 ATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTCAACTGGAAA 782380 >seq9 Length=406813 Score = 145 bits (160), Expect = 3e-29 Identities = 300/443 (68%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 218609 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 218666 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 218667 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 218725 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | | || || ||||| || Sbjct 218726 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCTCA 218785 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| | |||||||| || |||||||| ||| | Sbjct 218786 AAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAG 218845 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 218846 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 218902 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 218903 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 218962 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || |||| |||| || ||||| |||||||| |||||||| Sbjct 218963 TGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAATGG 219022 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 219023 TACTGATGGAATTGGTACAGGTT 219045 Score = 138 bits (152), Expect = 4e-27 Identities = 401/596 (67%), Gaps = 40/596 (7%) Strand=Plus/Plus Query 363744 GGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGGA 363803 ||||| || ||||| |||||||| || |||| || | || | | |||||| Sbjct 217800 GGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCCAAAAAATGTACT 217859 Query 363804 -TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAAG 363859 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 217860 CTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTAT 217915 Query 363860 TAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAGA 363919 | | |||| | | || ||| | ||||| || || ||| | |||||||| ||||| Sbjct 217916 TGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAGA 217975 Query 363920 AGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAGG 363979 ||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || || Sbjct 217976 AGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGGG 218035 Query 363980 ATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAAA 364039 |||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 218036 ATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTTC 218089 Query 364040 AGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAAA 364099 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | || Sbjct 218090 TTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTAA 218149 Query 364100 TATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTAT 364156 | | | || || ||| ||||| | | | || | ||| | || ||| |||| | | Sbjct 218150 TTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TTT 218207 Query 364157 GAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATTT 364213 | | ||||| ||||||||||| | ||||||| || ||||| | ||| | || ||| Sbjct 218208 GTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATTT---CATTCTTTACTTT 218263 Query 364214 AACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT-A 364266 | ||| ||||| | |||||||| ||||| || ||| |||| | ||| | Sbjct 218264 ATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTCA 218322 Query 364267 AATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATAtttt 364319 | ||||| ||||| ||||| |||||| || ||| ||| ||||||||||||| Sbjct 218323 AGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAATATTTT 218375 Score = 104 bits (114), Expect = 9e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 58297 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 58238 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 58237 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 58178 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | ||| |||| || || ||||| || Sbjct 58177 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGAAATATACCTCCTTCATATGG 58118 Query 96292 TGTTCC 96297 |||||| Sbjct 58117 TGTTCC 58112 >seq11 Length=169971 Score = 111 bits (122), Expect = 6e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 47319 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 47378 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 47379 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 47438 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 47439 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 47492 >seq15 Length=88607 Score = 87.8 bits (96), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 83644 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 83588 Query 420766 CGTAAGAA-TCTTCTA------CCACAATCATCATATTTAGATAATCCAGTAAATACAAC 420818 | ||||| | ||||| | | ||||| | |||| ||| | ||||||||||| Sbjct 83587 -GAAAGAAGTATTCTATTTTTTCTTCCATCATACTTTTTA-ATA--CTAGTAAATACAAT 83532 Query 420819 AGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAAT 420878 || | | | || ||| | || | ||| | || |||||||| || || ||||| || Sbjct 83531 AGATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGAT 83472 Query 420879 TAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATG 420938 |||| | | | | | | || ||| |||||||| | ||| |||| || ||| ||| Sbjct 83471 TAATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATG 83412 Query 420939 ATGA 420942 |||| Sbjct 83411 ATGA 83408 >seq3 Length=1156823 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| || || ||| ||| || Sbjct 488257 ATCAAGGCCTCTTCTTCCTGCTCTACCACTCATTTGAATGAACTCTCCAG-AGTTAACAA 488315 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 488316 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 488375 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 488376 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 488435 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 488436 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 488485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717944349944