Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13 423 2e-113 seq2 219 5e-52 seq1 167 3e-36 seq9 159 4e-34 seq4 104 3e-17 seq6 96.9 4e-15 >seq13 Length=100921 Score = 423 bits (468), Expect = 2e-113 Identities = 1067/1603 (67%), Gaps = 38/1603 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || || || || ||||| | ||||| |||||| || || || ||| Sbjct 3888 TCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCCTTTGAT 3829 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 ||||| |||||||| || ||||| || ||||| | ||||| | | ||||| || Sbjct 3828 AATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACA 3769 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||||| |||||||| ||||||| ||| || | || | |||||||||| | Sbjct 3768 GCAGATACATTCAAGATACCATTAGCATCAATATCAAAAGTGACTTCAATTTGTGGTACA 3709 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || ||||| | ||||||||| | || || | ||||| | | ||||||| | Sbjct 3708 CCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTA 3649 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | | | | ||||| ||||| |||| || | |||||| || ||||| Sbjct 3648 GTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCGCTC--TGGTTATCAGCAT 3591 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | || Sbjct 3590 AAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGCTTGG 3531 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||||| |||||| |||||| | || || || | || | || ||||| | ||| | Sbjct 3530 TCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAATAAGA 3471 Query 6987 GGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | || || || | | | | || |||| ||||||| || ||||| || | || || Sbjct 3470 GATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGCACCA 3412 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || || | ||| | |||||||||||||| | ||| Sbjct 3411 TAAGCAACAGCTTCATCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAATTCC 3352 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || |||| || || || ||||| || ||||| ||||| || | |||| Sbjct 3351 TGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATCATGT 3292 Query 7166 ACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 || ||| || || || | || ||| ||| || || || | | | | Sbjct 3291 ACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTT 3235 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGTATAG 7279 |||||| | || || ||||| || || | || | | |||| || ||| Sbjct 3234 GCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATA- 3176 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||| || || || | ||||| | ||||| || | ||| | | || || || Sbjct 3175 --ATCAATACCCTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGACAAA 3118 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 |||| |||||| |||||||| |||| | | | | || | | || | Sbjct 3117 GTTCTCTTTGCACGCTCACATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTT 3058 Query 7400 ATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTC 7453 | ||| | || ||| || | || || |||| || |||| | | |||||| Sbjct 3057 AAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCC---ACGAGTCTG 3001 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 3000 TTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAAATA 2941 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || ||||||| |||| || || |||||||| ||||||||||| | || || || | | Sbjct 2940 CCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAAT 2881 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | | |||||||| ||||| || || ||||| || || ||||| Sbjct 2880 ACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGC 2821 Query 7634 TCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || ||||| || | | ||| |||| |||||||| | | ||||| || || ||||| Sbjct 2820 TCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTG 2762 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| || || || || || || || || || || || || | | | | || ||| Sbjct 2761 ACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAATTTGGCGACC 2702 Query 7753 GAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||||||| Sbjct 2701 CAAGTATGCTTCAGAGATTTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAG 2643 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || | ||| ||||||| ||| | | || || || || |||||| | Sbjct 2642 CATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTATCCTTTGG 2585 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 ||| | || ||| | | ||| | ||||||| ||| || || || ||| Sbjct 2584 ACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAA 2525 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 |||||| || |||||||| || ||||||||||||||||||| || || | || ||| Sbjct 2524 CTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTG 2465 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||| || || || || |||||||| || | |||| ||||| || || || ||||| Sbjct 2464 ATTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCAGTAAATGCTACATATGATGG 2408 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || || || || ||||| ||||| | || ||| ||||| |||||| ||| || || Sbjct 2407 TGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACC 2348 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 || || || || || || |||||||||||||| || ||| || Sbjct 2347 AACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 2305 >seq2 Length=1218010 Score = 219 bits (242), Expect = 5e-52 Identities = 1160/1827 (63%), Gaps = 53/1827 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 363646 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 363587 Query 104428 GAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACACCT 104487 | || | | | | || | | ||||| | ||| ||| | ||| ||| Sbjct 363586 GCAAAGTTAGCATTTTCCATATGGATGTTCAAAGATTGCGATTGACAAACATATGGACCC 363527 Query 104488 CTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAAT 104547 ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 363526 CTATCTGCAGCCATATCAATTACTGTCTTTTGCTTGATTTCCCATACAGTCTTATAAAGC 363467 Query 104548 TCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCATA 104607 || | ||| || || || || || ||||||| | ||||| || | ||| Sbjct 363466 TCACGTATATCCTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAATA 363410 Query 104608 AGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGT 104664 | || | | | ||| | ||| | ||| | ||| ||||| |||| || || Sbjct 363409 ATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAGTGC 363350 Query 104665 TTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATAC 104724 ||||| || | || ||||| | ||| | | ||| || || | || | Sbjct 363349 GGATTTACTACAAAGAACTCACCAGATAGTACCCTACGATGATAAATGTTCGAGGTGAAT 363290 Query 104725 GGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG-- 104782 || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 363289 GGCTCAAAACTCTCATTGTTACCTAAAATTTGTGAAGTGGATGCTGTTGGCATTGGAGAT 363230 Query 104783 --CAAGA-AGAAG-ACTATT--CATAGTTCCTT-TCTTAACAAGTTTACGCATGGCATTC 104835 ||| | |||| || | | |||| || || || | |||| || | || | Sbjct 363229 ATCAATAGAGAATTACGAATACCATATTTGGAAATCCTATC---TTTAAGC---GAATCC 363176 Query 104836 CAATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATA 104892 ||||| | | ||| | | ||| || ||| |||||||||| ||||| | |||| Sbjct 363175 CAATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATA 363122 Query 104893 CCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCA 104952 || ||||| || || || | | ||||| || ||||| || |||| ||||| ||| Sbjct 363121 CCCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGACCATATTTTTCTGCAAGCTCA 363062 Query 104953 CACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTC 105012 || | ||||| | ||| | |||||| ||| || || | | || | || | Sbjct 363061 CAGCTAGCATCGAGAGCTGCATAATAGATAACTTCAAAGATTTGTTTATTTAACTTCTTA 363002 Query 105013 GATTCTTCTGAACCGAATGTCATTCTTAACATGAT-AAACACGTCAGCGAGACCCTGAAC 105071 | | | || || || ||| ||| | | ||| || ||||| ||| ||||| || |||| Sbjct 363001 GCTCCCTCAGACTCGTATGGCATACGAAGCATCATGAAACA-GTCTGCGAGCCCTTGAAT 362943 Query 105072 ACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAA 105131 ||||| || | || | || | | ||| || ||| | | || | | || | Sbjct 362942 GCCAATCCCCAATGGACGATGTCTTAAATTCGAGTTTTTACATTCTT---TAAGAGAATA 362886 Query 105132 GTTTTTA---TCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAA 105188 | | | ||||| | || || || || | |||| || |||||||| | ||| Sbjct 362885 ATATCCAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAA 362826 Query 105189 CTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGC 105248 || ||| | |||| || || | ||||||| | ||||| | | || || || Sbjct 362825 CTTATCAAAATCAAACGTCTTGTTATTTTTATCAACGAACTTTGGAAGGCCAATAGACGC 362766 Query 105249 GAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATT 105308 |||||||| ||||| ||| ||||| || | || | |||||||| || || || Sbjct 362765 CAGATTACAAACGGCAACTTCGTCCTTGCTAGTGTATTCTATGATTTCTGTGCATAAGTT 362706 Query 105309 TGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTG 105366 ||| ||| || || | | ||| ||||| |||||| ||| || ||||| Sbjct 362705 ACTTGAAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTA 362648 Query 105367 TAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCC 105426 ||| ||| |||| || ||||| ||| |||| | | | ||| ||||| | | Sbjct 362647 TAACAAATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTC 362588 Query 105427 GAAGCTGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTT 105484 ||| | || | ||| || | |||| || || | || || || | | Sbjct 362587 TGCGCT--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCT 362530 Query 105485 CAAACTCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGA 105542 ||| || | || | || ||| | || |||| || | ||| || || | | | Sbjct 362529 TAAAATCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGT 362472 Query 105543 CCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAA 105602 ||||| ||| ||||| | || |||||||| ||| |||| ||| | ||| | ||| Sbjct 362471 CCAATCTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAA 362412 Query 105603 GAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662 ||| || ||||| ||| |||||| | || |||||| | |||||| | ||| || | Sbjct 362411 GAGATCGCGACATCTCATCTCTTCCTTTCCATGATTCTTCCTAATTTCAATAAACTCTAC 362352 Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGC 105719 || ||| ||||||||||||| ||||| | |||||| | |||||||| | || | Sbjct 362351 AACATCAACGTGCCATGGTTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACC 362292 Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779 ||||| | ||| || || || ||||| || || | ||| ||||| | |||| || Sbjct 362291 TTGATCAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGA 362232 Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839 | | ||||||||||| ||||||| ||| | || | | | || || | ||| Sbjct 362231 TCTCCCATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTTACTGCCACCCC 362172 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || |||||| || || || | ||| ||| || | ||||||| Sbjct 362171 AAGGCCACCTGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTT 362112 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 || |||||| | || | | ||||| ||||||||||| |||| || || || Sbjct 362111 TATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGCGGCGTGCC 362052 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || || || |||||||||||| | || | || ||||||| || ||||| Sbjct 362051 TGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGT 361992 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 ||| || | |||||||| | |||||||||| || || ||||| |||| Sbjct 361991 TTCAAGTGCAGCTTCAATATCACCACAATGAATACCACAAGAAACCCGCATCAGAAGATG 361932 Query 106080 TTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTT 106139 ||| ||| |||| | || || ||||||||| | ||||| | |||| || ||||| Sbjct 361931 TTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTT 361872 Query 106140 TAAACCAAAATACCCAAACTCAAAATC 106166 || ||||||| || | |||||||| Sbjct 361871 GAAGGCAAAATAATCATATTCAAAATC 361845 >seq1 Length=1295931 Score = 167 bits (184), Expect = 3e-36 Identities = 280/400 (70%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||||||||| ||||| ||||| || ||||| || || || ||| || || Sbjct 86181 TCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAA 86122 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 | || |||||| | || | ||||||||||| ||||||||||||| || | | Sbjct 86121 AACGCCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATAC 86062 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | | || | || | | ||||||| | ||| | || || || || || || Sbjct 86061 TAAAATGCTCTTCTCAGCTT------TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGT 86008 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| |||||||||||||| | ||| |||| |||||||||| | ||||| || || | Sbjct 86007 TGGCTCATTAATAATACGGATTACA-TTCAAACCAGCAATAGCACCAGCATCCTTGGTAG 85949 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || || || | ||| |||||||| || ||||| || | || || | | | |||| || Sbjct 85948 CCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCT 85889 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCT 7807 |||||||||| | || || || |||||||| ||| | ||| ||||| | |||| |||| Sbjct 85888 TACCGAGATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAG-ACCATAGCGGAAACCTCT 85830 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 || | || || || ||| | ||||| |||| | ||||| Sbjct 85829 TCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 85790 Score = 165 bits (182), Expect = 1e-35 Identities = 381/572 (67%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 87011 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 86952 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 86951 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 86892 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | || Sbjct 86891 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCG 86832 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 86831 AGGAGGTTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 86772 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 86771 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 86712 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 86711 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 86652 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || || | | | |||||||| | |||||| | ||| Sbjct 86651 ACATCCAATAATAATAAATC----AC---TACCT--CCTTCACCTGCTAAGATACCAGCT 86601 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 86600 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 86541 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 86540 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCTACC 86481 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGAT 7182 |||||||| |||| |||| || || | ||| Sbjct 86480 AAAACGATCTCATCTACTTCAGACTTTTTGAT 86449 >seq9 Length=406813 Score = 159 bits (176), Expect = 4e-34 Identities = 337/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||||||||| Sbjct 219043 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 218984 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 218983 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 218924 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 218923 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 218868 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | | ||| | Sbjct 218867 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTAG 218808 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | || || ||| Sbjct 218807 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGTAATGATGATTC 218748 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 218747 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 218688 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 218687 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 218628 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 218627 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 218568 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 218567 ATGAATAAAATCA-AAATA 218550 >seq4 Length=1032896 Score = 104 bits (114), Expect = 3e-17 Identities = 209/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | | | Sbjct 782401 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GAA 782458 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 782459 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 782518 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 782519 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 782576 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 782577 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTGGGTATTGTGGTATTTCTGTTAATTAATC 782635 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 782636 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 782692 Query 6984 ACA 6986 ||| Sbjct 782693 ACA 782695 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 783202 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 783261 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 783262 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 783315 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 783316 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 783374 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 783375 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 783434 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || | |||| ||||| | ||| || | ||||||||||| Sbjct 783435 AGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 783485 >seq6 Length=850566 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/420 (67%), Gaps = 27/420 (6%) Strand=Plus/Plus Query 11280 ATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACC 11339 ||||||||| || || ||| ||| ||| || | || ||| ||| |||||| | | Sbjct 719195 ATCAAATCTTCCTGGACGTGTTAATGCAGGATCTAATACATCAGAACGATTTGTTCCTGC 719254 Query 11340 TATAACAACAATTTCAGTTTCATTCTCGAAA-CCATCCATTTCTGTTAATAAT-TGGTTA 11397 || ||| | | | || | | ||| ||| |||||||||||| || ||| || ||| Sbjct 719255 TAAAACTATTACTCCATTATT-TTCAGTAAATCCATCCATTTCTAC-AAGAATCTGATTA 719312 Query 11398 ATTGTTTGTTCACGCTCATCGTTTG------CCGCAAACCCATTCATACTTCT------T 11445 | || ||| | |||||| || | | ||||| ||| | ||| | | Sbjct 719313 AGAGTGCTTTCTCTCTCATCATTAGATGAAGCAGCAAATCCACCCC--CTTTTGCACGCT 719370 Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGTG 11503 ||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | || Sbjct 719371 TTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTTG 719427 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 || | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 719428 CCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA-- 719485 Query 11564 ATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAA 11621 || || || || | || ||| || || || |||||| || | ||| |||||| Sbjct 719486 ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCTAA 719545 Query 11622 AAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| Sbjct 719546 TAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCACC 719605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120