Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq13 253 2e-61 seq4 242 3e-58 seq9 170 2e-36 seq1 125 6e-23 seq10 122 7e-22 seq7 116 3e-20 >seq13 Length=100921 Score = 253 bits (280), Expect = 2e-61 Identities = 581/865 (67%), Gaps = 25/865 (3%) Strand=Plus/Plus Query 551749 TATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTG 551808 || || | ||||||||| | ||| || |||||| ||| ||| |||| | |||| Sbjct 2925 TAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACCGCTGGTGATACTCACTTGGGTG 2984 Query 551809 GCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACA 551868 | |||||||||||||| ||||| || || ||||| ||||||| || |||| || | Sbjct 2985 GTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTACAAGATTTCAAGAGAAAGAATA 3044 Query 551869 AAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAA 551925 || | ||| || || || ||| | |||| | | | || |||||| || || Sbjct 3045 GAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGAAGACTCAGAACTCAATGTGAGC 3104 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 | || || || || | |||||| ||||||| | || ||||| |||||||| | | || Sbjct 3105 GTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACAATTGAGTTAGATTCACTCTATG 3164 Query 551986 AGGGAATTGATTATA-ATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGAT 552044 |||| ||||||||| | ||| || || |||| ||| ||||| | || ||||| Sbjct 3165 AGGGTATTGATTATTCAGTTGCC-ATCAGTAGAGCCAGATTCGAAGAACTCTGCGCTGAT 3223 Query 552045 CTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAA- 552103 ||| | ||| | | ||||| || |||| | | ||| | || || || Sbjct 3224 TACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGCTGGTATGGACAAG 3283 Query 552104 --ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 ||| |||||||| |||| | |||||||| |||||| | ||||| || ||| Sbjct 3284 AGATCT---GTACATGATGTTGTATTGGTTGGTGGTTCTACACGTATTCCAAAGGTTCAG 3340 Query 552162 GAAATG-TTAAGTTCTTATTTCAATGGTAAAAA---ATTAAATGAAAGTGTTAATCCAGA 552217 | || || || || ||| || |||||| | || || | || | |||||||| Sbjct 3341 GCCTTGATTCAGGAATTCTTT-AACGGTAAAGAGCCATGCAAAGCAA---TCAATCCAGA 3396 Query 552218 TGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA---CAAACTGA 552274 ||| |||||||| |||||||| || | ||||| ||||| | ||| ||| | Sbjct 3397 TGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAGCAATCCTC 3456 Query 552275 TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAAC 552334 || |||| || | || | | |||||| |||| |||| || ||||||||||| Sbjct 3457 TGCCG---TACAGGATCTCTTATTATTGGATGTTGCTCCATTATCACTCGGTTTAGAAAC 3513 Query 552335 AGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATC 552394 | ||| ||| ||||||| || ||||| || | ||||| ||||| || || || | Sbjct 3514 TGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATACAACTATCCCAGCAAAGAAGAC 3573 Query 552395 TCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGG 552454 | || || |||| ||| | ||||| || | | ||| || ||| ||| ||| || Sbjct 3574 ACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGTGTCTTGATCCAAGTTTATGAGGG 3633 Query 552455 AGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCC 552514 || ||| | ||||| ||||| ||| ||||| | || || | || |||||||| Sbjct 3634 TGAGAGAGCCATGACTAAGGATAACCATCTCCTTGGAAAGTTCCATCTTGATGGTATTCC 3693 Query 552515 TCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 || || || | || ||||| ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 3694 ACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACTTTTGATATTGATGCTAATGGTAT 3753 Query 552575 TTTGAATGTGACTGCTTGTGATAAA 552599 |||||||| ||||| ||||||| Sbjct 3754 CTTGAATGTATCTGCTGTTGATAAA 3778 Score = 232 bits (256), Expect = 5e-55 Identities = 386/553 (70%), Gaps = 11/553 (2%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| |||||||| |||||||| ||||||||||| ||| ||| | || Sbjct 2308 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 2367 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || ||| || | || |||||||||||| | || || ||||| ||||| | || || Sbjct 2368 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 2427 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 |||||||| | | | |||||||||||||||| |||||| || | ||||| || Sbjct 2428 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAA 2487 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || ||||||||||||||||| | ||||| |||| ||| ||||| | | || || Sbjct 2488 CACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAG 2547 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC--TGGAAAACCTTAT----AT 550284 ||||||| || ||||| || || | |||| | | | ||| || | || | Sbjct 2548 TGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAG 2607 Query 550285 TG-AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 || || ||||| | | || | || |||| | ||| ||||||| |||||| Sbjct 2608 TGTAAACTACTTAGG--TGAAAAG--AAGGAATTCCATGCTGAAGAAATTTCTGCTATGG 2663 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 ||||| || ||||| ||| | || | | |||| || ||| | |||| | Sbjct 2664 TTTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTG 2723 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 || | ||||| ||||| ||||| |||||||||||||||||||| || || ||||| || Sbjct 2724 TAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTG 2783 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | ||||| | | || || || || || ||||| ||||| |||| | Sbjct 2784 CAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTT 2843 Query 550524 ATGGACTTGATAA 550536 |||| |||||||| Sbjct 2844 ATGGTCTTGATAA 2856 Score = 91.5 bits (100), Expect = 1e-12 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||| | | ||| || ||||| |||||||| ||| | || ||||| | | Sbjct 2852 CAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAAC 2793 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| |||||| || ||||||||||||| ||||| ||||| || |||| Sbjct 2792 CAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAA 2733 Query 361821 CAGTAATCACTGCTTTTTCAACTTG 361845 |||||| || || || | || ||| Sbjct 2732 CAGTAACTACAGCATTCTTAATTTG 2708 >seq4 Length=1032896 Score = 242 bits (268), Expect = 3e-58 Identities = 480/700 (69%), Gaps = 33/700 (5%) Strand=Plus/Plus Query 368481 TGAAACATTTAGAGAAAAAATGTTAAATAATAATTCTAAAATAAATTGGATGCCATCTAA 368540 |||| | || | ||| ||| | |||| ||||||| |||| |||||||| ||| | | Sbjct 880461 TGAATCTTTAAAAGATAAATTATTAATTAATAATGAAAAAACTAATTGGATTCCAAATTA 880520 Query 368541 TATTGGAACAAAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAG 368600 | || | |||| ||| |||||||| | ||| || | ||||||||| || | Sbjct 880521 TGTTAAAGAAAAAAGATTTCATAATTGGTTACAAGATGCTAGAGATTGGTGTGTTAGTCG 880580 Query 368601 AAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGT 368660 | | | ||||||||||| || || || ||||| ||| || ||| | | ||| Sbjct 880581 TAATCGTTTTTGGGGAACACCTATACCTATATGGGTATCAGAAGATTATACAATTATTAA 880640 Query 368661 TTGTATAGGTTCAATTAAAGAATTGCAAGAATTA---TCTGGTGTGCAAAAT------AT 368711 ||||| ||| ||| ||||||| || ||| || | | || || || Sbjct 880641 ATGTATTGGTAGTATTGAAGAATTAAAATCTTTAGCATCAAATTTAAAAGATGAAGAAAT 880700 Query 368712 TAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCC--ATCAAAGAAAGGAAAA 368769 || |||| ||||| | || |||||| | ||| ||||||| ||| |||| ||||| Sbjct 880701 TAATGATATACATCGTCATTTTATTGATTATATTGAAATTCCTGATCCAAGA--GGAAAT 880758 Query 368770 GGTTT------ATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCT 368823 || ||| || |||||| |||||| ||||| ||||||||||| |||||| Sbjct 880759 AATTATCCACCATTAAAAAGAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTGGTTCT 880818 Query 368824 ATGCCTTATGG-TCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAA 368882 |||||||||| || | || ||||||||||||| || | ||| ||| ||||| Sbjct 880819 ATGCCTTATGCATCTATTA-ATTATCCATTTGAAAATCAAGAATTATTTAATAAT----- 880872 Query 368883 AGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATAC 368942 | ||| || | |||||||| ||| | ||||||||| | || ||||||||||| Sbjct 880873 ATATTTCCTG-CAGATTTTGTTGGTGAAGGTTTAGATCAAACAAGAGGATGGTTTTATAC 880931 Query 368943 CCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAAC 369002 || | |||||||| ||||| | || ||| |||| |||||||||||| | || || | Sbjct 880932 ATTAATGGTATTATCAACAGCATTATTTGATCAACCAGCTTTTAAAAATATTATTGTTAA 880991 Query 369003 TGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCC 369060 |||| | ||| |||||||||||| |||| ||||||||||| ||| |||||| | Sbjct 880992 TGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGTCAAAAAGATTAA--AAAATTATCCT 881049 Query 369061 GATCC-TAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTC 369119 ||||| | | || || || |||||| |||||| ||| |||| ||||||| || | Sbjct 881050 GATCCATTAGATATT-GTTAATAAATATGGTGCAGATTCTTTAAGATTATTTTTAATTAA 881108 Query 369120 ATCACCTGTAGTAAAAGCAGAATCTATTAAATTTGATGAA 369159 ||||| || || | ||||||| || | | |||| | ||| Sbjct 881109 TTCACCAGTTGTTAGAGCAGAAACTTTAAGATTTAAAGAA 881148 Score = 114 bits (126), Expect = 1e-19 Identities = 207/300 (69%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 || ||||| || ||||| | ||| | ||||| | || || || | ||| | || Sbjct 782687 GACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATT 782628 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | |||||||| || || || |||||| | ||||| || || | |||| ||| Sbjct 782627 AACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAAT 782568 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 |||||| ||| |||| || |||| ||||||||||| |||| || |||||||| Sbjct 782567 CAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAG 782508 Query 552483 CAACTTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAAT 552541 ||||| | ||| || | | || |||||||| || || | || || || ||||| Sbjct 782507 TTGCTTGGACAATTTGAAATGATG-GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAAT 782449 Query 552542 TGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 |||||| || || ||||| ||||| ||||||||| ||||||| ||| |||||| || Sbjct 782448 TGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 782389 Score = 100 bits (110), Expect = 2e-15 Identities = 323/490 (66%), Gaps = 16/490 (3%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 ||||||||||||||||| ||||| ||| | |||||||||||||| | | | || Sbjct 879322 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 879379 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGAAGGGTTACAAAGTTGATAGAAGAAATT 367384 ||||||| | | |||||| || || || || | ||| |||||| | Sbjct 879380 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 879439 Query 367385 CTTGGGATTGTCATGGAGTTCCAATTGAA-ATGTTA--GCTAAAAAAGTAATCGGATA-C 367440 |||||||| |||||| | ||| | ||| ||| | | |||| || ||| ||| | Sbjct 879440 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTGATAAACAATTAA----ATATC 879495 Query 367441 ACAACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTCG-TAA 367499 |||| | |||| | | || | || || || | ||||||| ||| | | | Sbjct 879496 ACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGATCA 879555 Query 367500 TTTGGTTTTAAAATGTGCTGATCGCTGGTA-TCAAGATTTTGAACGTATTGGAAGATGGA 367558 ||| | |||| || | || | ||| | |||| | ||||| | ||||||||| | Sbjct 879556 ATTG-TATTAAGATATACTCAAGAATGGAAATCAAC-TGTTGAAAGAGTTGGAAGATTAA 879613 Query 367559 TTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGGG 367618 |||| | | |||| |||||||| |||||| ||||||||| || |||| |||| Sbjct 879614 TTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGGG 879673 Query 367619 CATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATATT 367678 |||||||||| | | || | | | ||| | || ||||| |||||||||||||| Sbjct 879674 TATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATATT 879733 Query 367679 CAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGTAG 367738 | || | ||| ||| | || || |||||||| || ||||||| ||| || Sbjct 879734 CTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTTA 879793 Query 367739 TTGATCCATC 367748 ||||||||| Sbjct 879794 ATGATCCATC 879803 >seq9 Length=406813 Score = 170 bits (188), Expect = 2e-36 Identities = 344/505 (68%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 428100 AACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAAT 428159 |||| || |||||||| || ||||||||||| | |||||||||||| | ||| |||||| Sbjct 219045 AACCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAAT 218986 Query 428160 ATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATCATGCT 428219 || |||||||| || ||| |||||| || ||| | | | |||| || Sbjct 218985 ATAAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCT 218926 Query 428220 CGATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCG---CTTG 428276 | || || | | ||| | ||| | || | ||||| ||||| | || |||| Sbjct 218925 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 218866 Query 428277 CGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAA 428336 | |||||| || ||| ||||| | |||||||| ||| || || | ||| | Sbjct 218865 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 218809 Query 428337 TATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTT 428396 |||||||||||| ||| ||||||| |||||||||||||| ||||| ||| ||| || Sbjct 218808 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGTAATGATGATT 218749 Query 428397 CACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTT 428456 | ||||||||||| | | || | ||| ||| ||||| || | ||||| Sbjct 218748 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTG-CAACTTTA--A 218692 Query 428457 CTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTTGA 428516 ||| |||| || || || | || | || ||| |||||| | |||| ||||| | Sbjct 218691 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 218632 Query 428517 ATCCATCCATAATATTAGGTATAGATCTTAAATTATC--ATCCACTGAGAATGATATTAG 428574 | ||||| | | ||| || |||||||| | |||| ||| ||| ||| ||| || Sbjct 218631 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 218574 Query 428575 TTCTTGATGAATGAAATCATAATAT 428599 ||||| |||||| |||||| ||||| Sbjct 218573 TTCTTTATGAATAAAATCAAAATAT 218549 >seq1 Length=1295931 Score = 125 bits (138), Expect = 6e-23 Identities = 275/401 (69%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 ||||||| | ||||| ||||| || | ||||| || ||||| ||||| || ||| | Sbjct 847210 TTTTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCG 847269 Query 344315 CTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGT- 344373 |||| ||| | |||||| ||||| |||||| ||||||||| || ||| || Sbjct 847270 ACTCCAATCTCTTTCCCGTATGGCCATTGTACATTACTTCATTTCC--ATTTTTC-TGAA 847326 Query 344374 -CCTAAAGCTACTAAATCATCATTAATTTTATTAATAT-TAACTCCTGTAAATGGAGTTG 344431 || | ||| || | | | | | || | | ||| | ||||| ||||||| Sbjct 847327 ACCCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGTAATTTTCGTAAAAGGAGTTG 847386 Query 344432 CATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGAC 344491 |||| || | | |||| |||||| || |||| || |||| |||||||||||| || | Sbjct 847387 CATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGC 847446 Query 344492 CTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTG 344551 | || |||||||| || ||| || |||||| |||||||| || |||| |||||| Sbjct 847447 CAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAATAATGTCTGGAA-TAATCC-C 847504 Query 344552 ATTTTGTG--AATGGAAGATCTGCA-CGATGAATTTTAAATCCAACTGTTCCTTTTTGTC 344608 || ||||| ||||| | ||| || || || ||| | || | ||| || ||||| | Sbjct 847505 ATCTTGTGTAAATGGCATATCCTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTGGC 847563 Query 344609 CAGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTT 344649 || ||| |||| || ||||| || || || |||||| Sbjct 847564 CATGTCTAGATGCAAACTTATCTCCAACATGAGGTATTCTT 847604 Score = 104 bits (114), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| ||||||||| |||||| | ||| ||||| ||||| || || | Sbjct 560183 ATATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGC 560242 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||||||||| || || ||||| || || ||| ||||| |||||| ||| Sbjct 560243 TGTTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTA 560302 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 || | | | ||| | || | || || || || | |||||| || ||||||||| Sbjct 560303 TCGGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTGC 560362 Query 563473 AT 563474 || Sbjct 560363 AT 560364 >seq10 Length=196662 Score = 122 bits (134), Expect = 7e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 |||||| | | ||||| || ||||||||||||||||||||||||||| | ||||| || Sbjct 167154 AAAGTAATTGTAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTA 167213 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTT 930773 | ||||| || ||||| || | || |||| | |||||||| ||| | |||| Sbjct 167214 AGATCTACAATCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTA 167273 Query 930774 CATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 |||| |||||| |||| |||||||| || |||||||||||| | |||| ||| || Sbjct 167274 TTAAGAGTTAATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATATTTA 167333 >seq7 Length=879027 Score = 116 bits (128), Expect = 3e-20 Identities = 150/204 (74%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | |||| ||| |||||||||| |||||||| ||| || | |||||| Sbjct 571471 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 571414 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| ||||| || | | ||| |||||||| || |||||||| ||||| ||||| ||| Sbjct 571413 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 571354 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 || || |||||||||||| || || || ||| | ||| | ||| || || || Sbjct 571353 CTTAACATTCTCAATTGTATC--TGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTC 571296 Query 563452 AGAGTTTTAACGAAAATTTGCATA 563475 | ||| ||||| ||||| |||||| Sbjct 571295 AAAGTCTTAACAAAAATCTGCATA 571272 Score = 105 bits (116), Expect = 5e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| |||||||| ||| || | ||||||||| ||||| Sbjct 569967 TCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAG 569908 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 || | | ||| |||||||| || ||||| || ||||||||||| ||| || || | Sbjct 569907 ATCAAACGTTGTTGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTC 569848 Query 563404 TCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||||||||| || || || ||| | ||| | ||| || || || | ||| || | Sbjct 569847 TCAATTGTATC--TGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGA 569790 Query 563462 CGAAAATTTGCATA 563475 | ||||| |||||| Sbjct 569789 CAAAAATCTGCATA 569776 Score = 105 bits (116), Expect = 5e-17 Identities = 130/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 563302 TCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCA 563361 |||| |||||||| ||| || | ||||||||| ||||| || | | ||| |||||| Sbjct 570177 TCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCA 570118 Query 563362 GGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGA 563421 || || |||||||| ||||| ||||| ||| || || |||||||||||| || Sbjct 570117 GGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTAACATTCTCAATTGTATC--TGAAG 570060 Query 563422 GTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || ||| | ||| | ||| || || || | ||| ||||||||||| |||||| Sbjct 570059 GTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTAACGAAAATCTGCATA 570004 Score = 105 bits (116), Expect = 5e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||| ||||| |||| |||||||| ||| || | ||||||||| ||||| Sbjct 570884 TCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAG 570825 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 || | | ||| |||||||| || ||||| || ||||||||||| ||| || || | Sbjct 570824 ATCAAACGTTGTTGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTC 570765 Query 563404 TCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||||||||| || || || ||| | ||| | ||| || || || | ||| || | Sbjct 570764 TCAATTGTATC--TGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGA 570707 Query 563462 CGAAAATTTGCATA 563475 | ||||| |||||| Sbjct 570706 CAAAAATCTGCATA 570693 Score = 102 bits (112), Expect = 7e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | |||| ||| |||||||||| |||||||| ||| || | |||||| Sbjct 569747 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 569690 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| ||||| || | | ||| |||||||| || |||||||| ||||| ||||| ||| Sbjct 569689 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 569630 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 || || |||||||||||| || || || ||| | ||| | ||| || || || Sbjct 569629 CTTAACATTCTCAATTGTATC--TGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTC 569572 Query 563452 AGAGTTTTAAC 563462 | ||| ||||| Sbjct 569571 AAAGTCTTAAC 569561 Score = 102 bits (112), Expect = 7e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | |||| ||| |||||||||| |||||||| ||| || | |||||| Sbjct 570664 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 570607 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| ||||| || | | ||| |||||||| || |||||||| ||||| ||||| ||| Sbjct 570606 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 570547 Query 563394 TTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAGTA 563451 || || |||||||||||| || || || ||| | ||| | ||| || || || Sbjct 570546 CTTAACATTCTCAATTGTATC--TGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTC 570489 Query 563452 AGAGTTTTAAC 563462 | ||| ||||| Sbjct 570488 AAAGTCTTAAC 570478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295048078820