Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13 607 1e-168 seq1 365 6e-96 seq7 159 5e-34 seq2 129 8e-25 seq4 105 9e-18 >seq13 Length=100921 Score = 607 bits (672), Expect = 1e-168 Identities = 1113/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 2305 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 2364 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 2365 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 2424 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||| || | ||| ||||| |||| ||||| ||||| ||||| |||| || || Sbjct 2425 TACTGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 2484 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 2485 AAACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 2544 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| |||||||| || || Sbjct 2545 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCAT 2604 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 2605 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 2664 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||| | | ||| | | | ||||| ||| | || |||| Sbjct 2665 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAA---TTAAGAATGC 2721 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || || ||||| || ||||| |||| ||| |||||||| || || |||||||| || | Sbjct 2722 TGTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGG 2781 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 2782 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 2840 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 2841 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 2899 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 2900 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 2959 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT-T 196008 || |||||||||||||| | |||||||||||||| ||| | || | | ||| | Sbjct 2960 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGT--GGAATTCT 3017 Query 196009 GTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064 || | | || ||| ||||||||| || | ||| | || |||| |||| ||| Sbjct 3018 GTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTT 3077 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| Sbjct 3078 TAAGAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAG 3137 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCC 196181 | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 3138 CTACAATTGAGTTAGATTCACTCTATGAGGGTATTGA---TTATTCAGTTGCCATCAGTA 3194 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGA 196239 | || | || ||||| | | |||||| || | || | || | || ||||| Sbjct 3195 GAGCCAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGA 3252 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGT 196296 ||||||| || || ||||| ||| ||| || |||| |||| | || Sbjct 3253 GAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTGGT 3309 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||| |||| || || ||||| || ||| Sbjct 3310 TGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAA 3369 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| | |||| | ||||| || |||||||| |||||||||||||| || || || || Sbjct 3370 AGAGCCATGCAAAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGC 3429 Query 196417 TGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||||| ||| | || ||| |||| | ||| || ||||| | || | ||||| Sbjct 3430 TGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGATGT 3486 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 ||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| | Sbjct 3487 TGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACG 3546 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 3547 TAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAG 3606 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACT 196653 ||||| || ||||| ||||| || || | || | |||||||||||||| || Sbjct 3607 CGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCT 3666 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 ||||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | | Sbjct 3667 TGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAG 3725 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | || ||||| || || ||||| || | || || | |||| || || ||| Sbjct 3726 TCACTTTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTG 3785 Query 196773 GCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | || | | | ||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 3786 GTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATT 3844 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||| | ||||| || || |||| || || || ||| Sbjct 3845 GAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 3889 >seq1 Length=1295931 Score = 365 bits (404), Expect = 6e-96 Identities = 1049/1580 (66%), Gaps = 64/1580 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 85494 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 85553 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 85554 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 85613 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 85614 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 85673 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || |||| ||| | ||||||||||| ||| |||| | |||||| | Sbjct 85674 GACTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAA 85733 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGA 195593 |||| || | || | ||||| || || | | | || |||||| | Sbjct 85734 GGATA---AGACTTTGTTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTACA 85786 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | ||| || | ||||||||||| ||||| || || ||||| |||| |||||| Sbjct 85787 TACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGG 85846 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| | |||||||| || | ||| || ||| | ||||| || || |||||| Sbjct 85847 TCTTGCTCAAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAG 85906 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| || Sbjct 85907 TAATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTG 85966 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | ||||| ||||| |||||||| || ||||||||| Sbjct 85967 CTATTGCTGGTTTGAA-TGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCT 86025 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | || | | ||| | |||||| Sbjct 86026 TTTGGTTTGGATAAGAAAGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGT 86079 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | ||||| || | ||||| || ||||| Sbjct 86080 GGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACA 86139 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| | || ||||| ||||||||| | || | || ||| || Sbjct 86140 AGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTATC 86199 Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCTT 196066 ||| | | ||| |||| | | |||| ||| | |||| || || || ||| Sbjct 86200 AAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCTT 86253 Query 196067 CGTCGGCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | |||||| | | | || || | || | || || | || ||||| | | ||| Sbjct 86254 CAGAAGCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCCCTTTCTTCAGCTCCACAAG 86311 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGA--ATTGACTTCTATAC--AACTATTACC 196180 | ||| |||||||| |||||| ||| || | ||| | ||| | ||| Sbjct 86312 TTAAGGTCGAGATTGA----AGGTTTGATGGAGGATGTAGATCTGAGCGAAACCTTGACC 86367 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 | || || || ||||| || |||| ||||| || ||| ||| || || ||| || Sbjct 86368 AGAGCTAAGTTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AA 86426 Query 196241 CAAGTACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || | || || || | |||||| | || ||||| || || | || || Sbjct 86427 GAAGGTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTAGG 86486 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAA 196357 || || || ||||| || ||||||||| || || || ||||| || || Sbjct 86487 TGGTTCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAG 86544 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || ||||| | || ||||| |||||||| || ||||||||||| ||||| || ||| Sbjct 86545 GAGCCAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCT 86604 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 | ||| | |||||| || | || ||| | | || | |||||| | Sbjct 86605 GGTATCTTAGCAGGTG--------AAGGAGGT-AGTGATTTATTATTATTGGATGTTACT 86655 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||| Sbjct 86656 CCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAAC 86715 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAG 196595 || | |||| || |||||| |||| |||||| || || |||||||| |||| Sbjct 86716 ACTGTTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAG 86773 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTT 196654 ||| | ||| || || ||||| || || || ||| || | ||||||||| | || || Sbjct 86774 CTGTACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAACCTCCTC 86832 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 |||| ||||| | | || || ||| | || || ||||||||||| || ||| | ||| Sbjct 86833 GGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTT 86892 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 || || || || | |||| ||| || | || | || |||| |||| | |||| Sbjct 86893 ACTTTTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGT 86952 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 ||||| || |||||| || || ||||| ||||| | || || |||| || || || Sbjct 86953 AAATCCGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAG 87012 Query 196835 CGTATGGTTCAAGATGCGGA 196854 |||||| || | || || || Sbjct 87013 CGTATGATTAAGGAGGCTGA 87032 >seq7 Length=879027 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 569772 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 569831 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 569832 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 569891 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 569892 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 569951 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 569952 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 570004 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 570689 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 570748 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 570749 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 570808 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 570809 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 570868 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 570869 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 570921 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 571272 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 571331 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 571332 AGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 571391 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 571392 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 571451 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 571452 CATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGCGG 571499 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || ||||| |||||||| | || ||||| | ||||| ||||| || || | || || Sbjct 569573 ACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCAGATACAATTGAGAATGTTAAGGCA 569632 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| ||||||||||| || ||||| ||||| ||||| | || ||||| || ||| Sbjct 569633 AAGATTCAGGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATCTTTGCAGGAAAA 569692 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || | || ||||| | || ||| ||||||||||| ||||||| ||||| ||| ||||| Sbjct 569693 CAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAGTCCACTTTACAC 569752 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || | || ||| | |||||| Sbjct 569753 TTAGTCTTGAGACTTAGAGGTGGT 569776 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || ||||| |||||||| | || ||||| | ||||| ||||| || || | || || Sbjct 570490 ACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCAGATACAATTGAGAATGTTAAGGCA 570549 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| ||||||||||| || ||||| ||||| ||||| | || ||||| || ||| Sbjct 570550 AAGATTCAGGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATCTTTGCAGGAAAA 570609 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || | || ||||| | || ||| ||||||||||| ||||||| ||||| ||| ||||| Sbjct 570610 CAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAGTCCACTTTACAC 570669 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || | || ||| | |||||| Sbjct 570670 TTAGTCTTGAGACTTAGAGGTGGT 570693 Score = 114 bits (126), Expect = 2e-20 Identities = 132/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || ||||| Sbjct 570000 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 570059 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||| ||||||||||| || ||||| | Sbjct 570060 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTG 570119 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGA 172034 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| Sbjct 570120 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGA 570177 >seq2 Length=1218010 Score = 129 bits (142), Expect = 8e-25 Identities = 1153/1831 (63%), Gaps = 50/1831 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| || ||||||| || || ||||| |||| | || || | | || Sbjct 361845 GATTTTGAATATGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 361904 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| |||||| |||||||||| Sbjct 361905 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTTTCTTGTGGTATTCAT 361964 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 361965 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 362023 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| || || || || || |||||||||||||| Sbjct 362024 TCATGCAACACCCACACTCTTTAATTCAGGCACGCCGCGACCTCAAATGTCATCTTGTTT 362083 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 362084 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 362143 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCT-TCA-TATTCACGATGTTCGTGCAAAC 78226 | ||| |||| || ||||| | || | || || | || || | | ||| Sbjct 362144 AAACATTAGTAAGACTGCAGGTGGCCTTGGGGTGGCAGTAAGTA--ATATTAGAG-GAAC 362200 Query 78227 AAGTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGT 78285 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || Sbjct 362201 TGGTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGT 362260 Query 78286 ATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCG 78341 | |||| || || | ||| | | |||| || | | | |||| | |||| | Sbjct 362261 TTATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-G 362319 Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401 | || || | ||||| ||||||| ||||| | || ||| | ||| || | || | Sbjct 362320 CAATTTATTTGGAACCATGGCACGTTGATGTTGTAGAGTTTATTGAAATTAGGAAGAATC 362379 Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461 | || | || || |||| | ||| | || |||| | ||| |||| ||||| | Sbjct 362380 ATGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGT 362439 Query 78462 TTATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520 | ||| | |||||||| |||||| | | ||| |||| | || |||||| | | || Sbjct 362440 TCATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAG 362497 Query 78521 GGTCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGA 78579 || || | |||||| | || || || || | || | || | || || | | Sbjct 362498 GGGATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACA 362557 Query 78580 AGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TC 78638 ||| | | | || || || | || |||| ||| || | | | | | || Sbjct 362558 AGGCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTC 362616 Query 78639 AAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAAC 78697 ||| ||||| || || || | ||| || ||||| |||| || || || |||| Sbjct 362617 AAATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAAC 362675 Query 78698 CAAAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754 || || || | || | | | ||| |||| | ||||||||||| | |||||| Sbjct 362676 CAGAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATAC 362732 Query 78755 ACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTT 78814 || ||| | ||| || || |||||||| | |||||| | || |||||||| ||| Sbjct 362733 ACTAGCAAGGACGAAGTTGCCGTTTGTAATCTGGCGTCTATTGGCCTTCCAAAGTTCGTT 362792 Query 78815 GATCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAAC 78873 ||| | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || Sbjct 362793 GAT-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTAC 362851 Query 78874 TAAAAATTTAAATCGTGTAATTGACCGTAACTACTA-CCCAGTCGAGACTGCTAAATATT 78932 | ||||| ||| | |||||| | || || | | ||| || |||| | | Sbjct 362852 GAGGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTTAAAGAATG-TAAAAACT 362910 Query 78933 CTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAAC 78991 | ||| | | |||| | ||| | || | || ||||||| | ||||| ||| |||| Sbjct 362911 CGAATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTCATG 362969 Query 78992 TTGTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAG 79051 || | || | || | ||| | || | | | || | ||| || || || || Sbjct 362970 ATGCTTCGTATGCCATACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATCTTTGAA 363029 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTAT 79111 ||| ||| |||||||| | || || || | || ||||| |||| |||| || || Sbjct 363030 GTTATCTATTATGCAGCTCTCGATGCTAGCTGTGAGCTTGCAGAAAAATATGGTCCATAC 363089 Query 79112 GAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 || | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 363090 GAAACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTT 363149 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGACGA-- 79229 | | | || ||| | || ||||||||| | | |||| | | | | | Sbjct 363150 ACACC---AGACTCTGGACTTTGTGATTGGGATTCGCT--TAAAGATAGGATTTCCAAAT 363204 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| | | || ||| | || | |||||||| || || || || | || || Sbjct 363205 ATGGTATTCGTAATTCTCTATTGATATCTCCAATGCCAACAGCATCCACTTCACAAATTT 363264 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAG 79349 | ||||| |||||| ||||||| |||| ||| | ||||| |||| |||| | | || Sbjct 363265 TAGGTAACAATGAGAGTTTTGAGCCATTCACCTCGAACATTTATCATCGTAGGGTACTAT 363324 Query 79350 CTGGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCT 79407 ||||||| || |||| || || || |||| | || ||||| ||| || ||| Sbjct 363325 CTGGTGAGTTCTTTGTAGTAAATCCGCA-CTTGCTAAATGATTTACTAGAGCTTGGGTTA 363383 Query 79408 TTGGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACAT 79464 | || | || | | || ||| | | || | |||| || ||| | ||||| || Sbjct 363384 TGGGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATAT 363439 Query 79465 AGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAA 79524 | | || || || |||| | |||||||||||||| |||||||| | ||||| Sbjct 363440 ACTTACAATTCCGGAGGATATACGTGAGCTTTATAAGACTGTATGGGAAATCAAGCAAAA 363499 Query 79525 ATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAA 79584 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 363500 GACAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAA 363559 Query 79585 TTTGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAA 79644 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 363560 CATCCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAA 363619 Query 79645 GTCTGGACTCAAGACAGGTATGTACTACTTG 79675 || || || ||||| || || || ||| Sbjct 363620 AAAAGGTCTAAAAACAGGCATTTATTATTTG 363650 >seq4 Length=1032896 Score = 105 bits (116), Expect = 9e-18 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 782702 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 782643 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 782642 TTTACTCGATTAATTAACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCC 782583 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 782582 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 782523 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 782522 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 782463 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 782462 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 782407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960