Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305395.1_202015-10- 01] 18 sequences; 9,179,731 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq13 352 2e-91 seq4 262 3e-64 seq1 242 2e-58 seq10 150 1e-30 seq9 141 6e-28 seq7 120 2e-21 seq2 105 4e-17 >seq13 Length=96444 Score = 352 bits (390), Expect = 2e-91 Identities = 669/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 1078 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 1137 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| || || ||||| Sbjct 1138 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTA 1197 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATC---TGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | || ||| || ||||| ||| |||||| Sbjct 1198 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGA 1257 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 1258 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 1317 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | ||| || ||||||||| | || | || || | | Sbjct 1318 ATTGAGTTAGATTCACTCTATGAGGGTATTGATTATTCAGTTGCCATCAGTAGAGCCAGA 1377 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 1378 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 1437 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 1438 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 1497 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 1498 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 1555 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 1556 AAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 1615 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 1616 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 1666 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 1667 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 1726 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 1727 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGT 1785 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 1786 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 1845 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| ||| Sbjct 1846 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACT 1905 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| ||||||| | | ||| Sbjct 1906 TTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTGGTAAG 1965 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 1966 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 2025 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 2026 ATGGTTAATGATGC 2039 Score = 280 bits (310), Expect = 1e-69 Identities = 394/551 (72%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 484 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 543 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | |||||| Sbjct 544 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACT 603 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| ||||| | || Sbjct 604 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAAC 663 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 664 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 723 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | ||| ||| || Sbjct 724 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAGT 783 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 784 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 843 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||| | | |||| | || | || | | |||| ||| || Sbjct 844 CAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTGTAGTT 903 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || |||||||||||||| || ||||| || |||| Sbjct 904 ACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTGCAATT 963 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 964 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 1023 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 1024 CTTGATAAGAA 1034 >seq4 Length=1006061 Score = 262 bits (290), Expect = 3e-64 Identities = 687/1029 (67%), Gaps = 63/1029 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 867169 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 867228 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 867229 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 867280 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || ||||| || |||| |||| ||| || Sbjct 867281 CTAATGGTAGATTTACTGAACCTGTTAGTGATTTAAAAGGAATATGGTTTAAAGATTCTG 867340 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 867341 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 867397 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 867398 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 867456 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 867457 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 867510 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 867511 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 867568 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 867569 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 867628 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAG--- 297217 || ||| || ||| | | || | ||||||||| |||||||||||||| Sbjct 867629 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 867688 Query 297218 --------AATTTTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCA 297269 ||||| | || ||| | ||||||||| ||||| | || |||||| | Sbjct 867689 TAGCATCAAATTTAAAAGA--TGAAGAAATTAATGATATACATCGTCATTTTATTGATTA 867746 Query 297270 AATAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGT 297323 || |||||||| || | |||||| | || ||| | || | || Sbjct 867747 TATTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGT 867806 Query 297324 TTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGA 297383 ||| ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| Sbjct 867807 TTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCTATTAATTATCCATTTGA 867866 Query 297384 AAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAAT 297443 |||| ||| | || | | | | ||| | |||||||||| | ||| | Sbjct 867867 AAATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTT 867920 Query 297444 TGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAA 297503 |||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | | Sbjct 867921 AGATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCA 867980 Query 297504 ACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAAT 297563 |||||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||| Sbjct 867981 ACCAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAAT 868040 Query 297564 GTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGC 297620 ||||||||| |||| ||||||||||||||| | || ||| | ||||||||||||| Sbjct 868041 GTCAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGC 868097 Query 297621 AGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAA 297678 |||| ||||| | |||||| | || || |||| || |||| ||| ||| | | | | Sbjct 868098 AGATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGA 868155 Query 297679 TTTGATGAA 297687 ||| | ||| Sbjct 868156 TTTAAAGAA 868164 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 866338 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 866395 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 866396 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 866455 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 866456 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 866508 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 866509 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 866568 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 866569 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 866628 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 |||||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 866629 ATTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 866688 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| || | | ||| | || ||||| ||| ||||| ||| Sbjct 866689 GTATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 866748 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 866749 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 866808 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 866809 AATGATCCATCTGT 866822 Score = 152 bits (168), Expect = 3e-31 Identities = 276/398 (69%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 768315 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 768258 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 768257 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 768208 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATG 475968 ||||||| | || || || | ||| | ||| |||||||||| | || |||| Sbjct 768207 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 768148 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 |||| | | || ||||| |||||| | | || |||||||| || || || | Sbjct 768147 AAAAAGAGCCAA-GTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGT 768089 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTT 476086 || |||| |||||| |||| || |||||||| |||||| ||| ||| | Sbjct 768088 TTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGAT 768029 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| || |||||||| ||||||||||||||||| || |||||||||||| Sbjct 768028 G--GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGAT 767971 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||| ||| | |||||| ||| |||||| || Sbjct 767970 GCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 767933 Score = 123 bits (136), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 769037 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 768979 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 768978 GTTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 768919 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| Sbjct 768918 TCTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCA 768859 Query 474860 TATGG 474864 || || Sbjct 768858 TACGG 768854 >seq1 Length=1281265 Score = 242 bits (268), Expect = 2e-58 Identities = 395/559 (71%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 84602 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 84661 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 84662 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 84721 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 84722 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 84779 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 || | || || | || ||| | ||||||||| |||| | ||| |||||||| | Sbjct 84780 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 84839 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA 474629 ||| | | | || | | || | || || | | | || || || ||| ||| Sbjct 84840 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGT-- 84897 Query 474630 TACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | | ||||| | || ||||| | || ||| | |||| | ||||| || Sbjct 84898 TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGTCTTGCT 84957 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||| |||||| ||| || ||| | ||||| || | ||||||| |||||||||||| Sbjct 84958 CAAGATGAAAGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTA 85016 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| || ||||||||| |||| ||||| || || || ||||| || |||| Sbjct 85017 CTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTG 85076 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| |||| Sbjct 85077 CTGGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTT 85136 Query 474867 TTGATAAGAATTCTGACAA 474885 | |||||||| |||| || Sbjct 85137 TGGATAAGAAAGCTGAGAA 85155 Score = 140 bits (154), Expect = 2e-27 Identities = 260/380 (68%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 85667 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 85726 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || | | | || ||||| | |||| ||||| | | |||||| || Sbjct 85727 GGAGGT-AGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTATT 85777 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||| Sbjct 85778 GAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAG 85837 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || |||| || ||||| |||||||| || ||||| ||||| | | | Sbjct 85838 AAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTTAT 85897 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || ||||| | | | ||||| ||||| ||| || |||| || | ||| || Sbjct 85898 GAGGGTGAGCGTCCAATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGA 85957 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | || Sbjct 85958 ATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGAT 86017 Query 476153 GGTATTCTTAATGTTACTGC 476172 |||||| | | |||| ||| Sbjct 86018 GGTATTTTACAAGTTAGTGC 86037 Score = 132 bits (146), Expect = 3e-25 Identities = 280/404 (69%), Gaps = 24/404 (6%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 834133 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 834191 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 834192 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 834250 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 834251 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 834308 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || ||||| || | | | Sbjct 834309 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCGCCCTCCAAT 834363 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | |||||||||||| || || ||||| |||||||| Sbjct 834364 CCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGCCAATTGTCATACGC 834423 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 834424 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 834483 Query 269464 ATATCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 ||||| ||| | || || ||| | || | |||||| ||||| Sbjct 834484 ATATC--CTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTG 834524 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 547278 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 547337 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 547338 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 547397 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 547398 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 547454 >seq10 Length=202276 Score = 150 bits (166), Expect = 1e-30 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| Sbjct 158328 TAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTAAGATCTACAA 158387 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | | |||||| ||||| || |||| ||||||| |||| | | Sbjct 158388 TCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 158447 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||||| |||| |||||||| || |||||||||||| | |||| ||| Sbjct 158448 ATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 158493 >seq9 Length=407447 Score = 141 bits (156), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || |||||| || Sbjct 217680 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 217621 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 217620 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 217563 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||||||| Sbjct 217562 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 217503 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 | |||||| || || | ||| |||||||||||||| || ||| | ||||| Sbjct 217502 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 217446 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACTGT 355542 || |||||||||||| ||||||| ||||| || | ||||| | || | ||| | Sbjct 217445 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGT-AATGATGAT 217387 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 |||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 217386 TCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA-- 217329 Query 355603 TCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTA 355662 ||| |||| || || || || || | | |||||||||||| ||||| Sbjct 217328 -GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTT 217270 Query 355663 AGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAA 355720 | ||| || || || || || ||||| || |||| ||| ||| |||| | | || Sbjct 217269 AAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAA 217212 Query 355721 GTTCGCGATGAATAAAATCATAATAT 355746 |||| ||||||||||||| ||||| Sbjct 217211 GTTCTTTATGAATAAAATCAAAATAT 217186 >seq7 Length=843204 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 552649 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 552592 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 552591 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 552532 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 552531 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 552472 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 552471 AGTCTTAACGAAAATCTG 552454 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 552193 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 552136 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 552135 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 552076 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 552075 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 552016 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 552015 AGTCTTAACAAAAATCTG 551998 Score = 105 bits (116), Expect = 4e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 552401 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 552342 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 552341 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 552282 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | |||||| || ||||| || Sbjct 552281 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGACAAAAATCTG 552226 >seq2 Length=1228863 Score = 105 bits (116), Expect = 4e-17 Identities = 327/501 (65%), Gaps = 24/501 (5%) Strand=Plus/Minus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATTAATAAC-AG 894904 |||| |||| |||||||| || ||||| |||||||| ||| ||||| || | Sbjct 606777 TTATGATGGATTTGAACCTTCAGGAAGAATGCATATTGCTCAATGTATATTAAAGACTAT 606718 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | || | || | || |||| Sbjct 606717 TAATGTAAATAAGTTAACTGAAT----GTGGATGCGTTTTTGTATTCTACGTAGCAGATT 606662 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| ||||||||| ||||| || ||| ||| Sbjct 606661 GGTTTGCTCTACTCAATAATAAGATGGGCGGTGATCTTGAAAAAATCAAGATTGTTGGTG 606602 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 ||||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 606601 AATATTTCGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 606542 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || |||| Sbjct 606541 GGGCATCTGATTTTATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATA 606482 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 606481 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 606424 Query 895200 AGACGGAGATGAATTATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATAT 895259 ||| |||||| | | | || | | ||||||| ||||||||| || ||||| Sbjct 606423 AGAAAATGATGAACAACCATGTGCTTCAGTATTTTATCCATGCATGCAATGCGCTGATAT 606364 Query 895260 TTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGT 895319 || ||||| |||| ||||||||| || |||||| | |||||| | ||||| Sbjct 606363 ATTCCAACTC-------AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGT 606313 Query 895320 TAATATGCTCGCTCTCGAATA 895340 ||| ||||| ||| ||||| Sbjct 606312 TAACATGCTTGCTAGAGAATA 606292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178427892664