Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305395.1_202015-10- 01] 18 sequences; 9,179,731 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13 603 1e-167 seq1 365 6e-96 seq7 161 1e-34 seq2 123 3e-23 seq4 105 9e-18 >seq13 Length=96444 Score = 603 bits (668), Expect = 1e-167 Identities = 1112/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 480 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 539 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 540 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 599 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||| || | ||| ||||| |||| ||||| ||||| ||||| |||| || || Sbjct 600 TACTGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 659 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 660 AAACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 719 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| |||||||| || || Sbjct 720 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCAT 779 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 780 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 839 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||| | | ||| | | | ||||| ||| | || |||| Sbjct 840 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAA---TTAAGAATGC 896 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || || ||||| || ||||| |||| ||| |||||||| || || |||||||| || | Sbjct 897 TGTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGG 956 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 957 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 1015 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 1016 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 1074 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 1075 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 1134 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT-T 196008 || |||||||||||||| | |||||||||||||| ||| | || | | ||| | Sbjct 1135 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGT--GGAATTCT 1192 Query 196009 GTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064 || | | || ||| ||||||||| || | ||| | || |||| |||| ||| Sbjct 1193 GTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTT 1252 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| Sbjct 1253 TAAGAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAG 1312 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCC 196181 | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 1313 CTACAATTGAGTTAGATTCACTCTATGAGGGTATTGA---TTATTCAGTTGCCATCAGTA 1369 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGA 196239 | || | || ||||| | | |||||| || | || | || | || ||||| Sbjct 1370 GAGCCAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGA 1427 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGT 196296 ||||||| || || ||||| ||| ||| || |||| |||| | || Sbjct 1428 GAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTGGT 1484 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||| |||| || || ||||| || ||| Sbjct 1485 TGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAA 1544 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| | |||| | ||||| || |||||||| |||||||||||||| || || || || Sbjct 1545 AGAGCCATGCAAAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGC 1604 Query 196417 TGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||||| ||| | || ||| |||| | ||| || ||||| | || | ||||| Sbjct 1605 TGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGATGT 1661 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 ||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| | Sbjct 1662 TGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACG 1721 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 1722 TAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAG 1781 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACT 196653 ||||| || ||||| ||||| || || | || | |||||||||||||| || Sbjct 1782 CGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCT 1841 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | | Sbjct 1842 CGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAG 1900 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | || ||||| || || ||||| || | || || | |||| || || ||| Sbjct 1901 TCACTTTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTG 1960 Query 196773 GCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | || | | | ||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 1961 GTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATT 2019 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||| | ||||| || || |||| || || || ||| Sbjct 2020 GAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 2064 >seq1 Length=1281265 Score = 365 bits (404), Expect = 6e-96 Identities = 1049/1580 (66%), Gaps = 64/1580 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 84598 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 84657 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 84658 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 84717 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 84718 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 84777 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || |||| ||| | ||||||||||| ||| |||| | |||||| | Sbjct 84778 GACTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAA 84837 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGA 195593 |||| || | || | ||||| || || | | | || |||||| | Sbjct 84838 GGATA---AGACTTTGTTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTACA 84890 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | ||| || | ||||||||||| ||||| || || ||||| |||| |||||| Sbjct 84891 TACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGG 84950 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| | |||||||| || | ||| || ||| | ||||| || || |||||| Sbjct 84951 TCTTGCTCAAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAG 85010 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| || Sbjct 85011 TAATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTG 85070 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | ||||| ||||| |||||||| || ||||||||| Sbjct 85071 CTATTGCTGGTTTGAA-TGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCT 85129 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | || | | ||| | |||||| Sbjct 85130 TTTGGTTTGGATAAGAAAGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGT 85183 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | ||||| || | ||||| || ||||| Sbjct 85184 GGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACA 85243 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| | || ||||| ||||||||| | || | || ||| || Sbjct 85244 AGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTATC 85303 Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCTT 196066 ||| | | ||| |||| | | |||| ||| | |||| || || || ||| Sbjct 85304 AAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCTT 85357 Query 196067 CGTCGGCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | |||||| | | | || || | || | || || | || ||||| | | ||| Sbjct 85358 CAGAAGCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCCCTTTCTTCAGCTCCACAAG 85415 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGA--ATTGACTTCTATAC--AACTATTACC 196180 | ||| |||||||| |||||| ||| || | ||| | ||| | ||| Sbjct 85416 TTAAGGTCGAGATTGA----AGGTTTGATGGAGGATGTAGATCTGAGCGAAACCTTGACC 85471 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 | || || || ||||| || |||| ||||| || ||| ||| || || ||| || Sbjct 85472 AGAGCTAAGTTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AA 85530 Query 196241 CAAGTACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || | || || || | |||||| | || ||||| || || | || || Sbjct 85531 GAAGGTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTAGG 85590 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAA 196357 || || || ||||| || ||||||||| || || || ||||| || || Sbjct 85591 TGGTTCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAG 85648 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || ||||| | || ||||| |||||||| || ||||||||||| ||||| || ||| Sbjct 85649 GAGCCAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCT 85708 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 | ||| | |||||| || | || ||| | | || | |||||| | Sbjct 85709 GGTATCTTAGCAGGTG--------AAGGAGGT-AGTGATTTATTATTATTGGATGTTACT 85759 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||| Sbjct 85760 CCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAAC 85819 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAG 196595 || | |||| || |||||| |||| |||||| || || |||||||| |||| Sbjct 85820 ACTGTTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAG 85877 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTT 196654 ||| | ||| || || ||||| || || || ||| || | ||||||||| | || || Sbjct 85878 CTGTACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAACCTCCTC 85936 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 |||| ||||| | | || || ||| | || || ||||||||||| || ||| | ||| Sbjct 85937 GGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTT 85996 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 || || || || | |||| ||| || | || | || |||| |||| | |||| Sbjct 85997 ACTTTTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGT 86056 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 ||||| || |||||| || || ||||| ||||| | || || |||| || || || Sbjct 86057 AAATCCGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAG 86116 Query 196835 CGTATGGTTCAAGATGCGGA 196854 |||||| || | || || || Sbjct 86117 CGTATGATTAAGGAGGCTGA 86136 >seq7 Length=843204 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 551994 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 552053 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 552054 AGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 552113 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 552114 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 552173 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || | || ||| | |||||| Sbjct 552174 CATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGTGGT 552222 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 552218 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 552277 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 552278 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 552337 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 552338 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 552397 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 552398 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 552450 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || ||||| Sbjct 552446 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 552505 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||| ||||||||||| || ||||| | Sbjct 552506 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTG 552565 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 552566 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 552625 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 552626 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGCGG 552677 >seq2 Length=1228863 Score = 123 bits (136), Expect = 3e-23 Identities = 1152/1831 (63%), Gaps = 50/1831 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| || ||||||| || || ||||| |||| | || || | | || Sbjct 370059 GATTTTGAATATGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 370118 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| |||||| |||||||||| Sbjct 370119 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTTTCTTGTGGTATTCAT 370178 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 370179 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 370237 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| || || || || || |||||||||||||| Sbjct 370238 TCATGCAACACCCACACTCTTTAATTCAGGCACGCCGCGACCTCAAATGTCATCTTGTTT 370297 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 370298 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 370357 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCT-TCA-TATTCACGATGTTCGTGCAAAC 78226 | ||| |||| || ||||| | || | || || | || || | | ||| Sbjct 370358 AAACATTAGTAAGACTGCAGGTGGCCTTGGGGTGGCAGTAAGTA--ATATTAGAG-GAAC 370414 Query 78227 AAGTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGT 78285 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || Sbjct 370415 TGGTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGT 370474 Query 78286 ATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCG 78341 | |||| || || | ||| | | |||| || | | | |||| | |||| | Sbjct 370475 TTATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-G 370533 Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401 | || || | ||||| ||||||| ||||| | || ||| | ||| || | || | Sbjct 370534 CAATTTATTTGGAACCATGGCACGTTGATGTTGTAGAGTTTATTGAAATTAGGAAGAATC 370593 Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461 | || | || || |||| | ||| | || |||| | ||| |||| ||||| | Sbjct 370594 ATGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGT 370653 Query 78462 TTATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520 | ||| | |||||||| |||||| | | ||| |||| | || |||||| | | || Sbjct 370654 TCATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAG 370711 Query 78521 GGTCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGA 78579 || || | |||||| | || || || || | || | || | || || | | Sbjct 370712 GGGATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACA 370771 Query 78580 AGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TC 78638 ||| | | | || || || | || |||| ||| || | | | | | || Sbjct 370772 AGGCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTC 370830 Query 78639 AAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAAC 78697 ||| ||||| || || || | ||| || ||||| |||| || || || |||| Sbjct 370831 AAATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAAC 370889 Query 78698 CAAAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754 || || || | || | | | ||| |||| | ||||||||||| | |||||| Sbjct 370890 CAGAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATAC 370946 Query 78755 ACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTT 78814 || ||| | ||| || || |||||||| | |||||| | || |||||||| ||| Sbjct 370947 ACTAGCAAGGACGAAGTTGCCGTTTGTAATCTGGCGTCTATTGGCCTTCCAAAGTTCGTT 371006 Query 78815 GATCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAAC 78873 ||| | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || Sbjct 371007 GAT-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTAC 371065 Query 78874 TAAAAATTTAAATCGTGTAATTGACCGTAACTACTA-CCCAGTCGAGACTGCTAAATATT 78932 | ||||| ||| | |||||| | || || | | ||| || || | | | Sbjct 371066 GAGGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTTAAAGAATG-TACAAACT 371124 Query 78933 CTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAAC 78991 | ||| | | |||| | ||| | || | || ||||||| | ||||| ||| |||| Sbjct 371125 CGAATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTCATG 371183 Query 78992 TTGTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAG 79051 || | || | || | ||| | || | | | || | ||| || || || || Sbjct 371184 ATGCTTCGTATGCCATACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATCTTTGAA 371243 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTAT 79111 ||| ||| |||||||| | || || || | || ||||| |||| |||| || || Sbjct 371244 GTTATCTATTATGCAGCTCTCGATGCTAGCTGTGAGCTTGCAGAAAAATATGGTCCATAC 371303 Query 79112 GAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 || | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 371304 GAAACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTT 371363 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGACGA-- 79229 | | | || ||| | || ||||||||| | | |||| | | | | | Sbjct 371364 ACACC---AGACTCTGGACTTTGTGATTGGGATTCGCT--TAAAGATAGGATTTCCAAAT 371418 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| | | || ||| | || | |||||||| || || || || | || || Sbjct 371419 ATGGTATTCGTAATTCTCTATTGATATCTCCAATGCCAACAGCATCCACTTCACAAATTT 371478 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAG 79349 | ||||| |||||| ||||||| |||| ||| | ||||| |||| |||| | | || Sbjct 371479 TAGGTAACAATGAGAGTTTTGAGCCATTCACCTCGAACATTTATCATCGTAGGGTACTAT 371538 Query 79350 CTGGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCT 79407 ||||||| || |||| || || || |||| | || ||||| ||| || ||| Sbjct 371539 CTGGTGAGTTCTTTGTAGTAAATCCGCA-CTTGCTAAATGATTTACTAGAGCTTGGGTTA 371597 Query 79408 TTGGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACAT 79464 | || | || | | || ||| | | || | |||| || ||| | ||||| || Sbjct 371598 TGGGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATAT 371653 Query 79465 AGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAA 79524 | | || || || |||| | |||||||||||||| |||||||| | ||||| Sbjct 371654 ACTTACAATTCCGGAGGATATACGTGAGCTTTATAAGACTGTATGGGAAATCAAGCAAAA 371713 Query 79525 ATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAA 79584 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 371714 GACAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAA 371773 Query 79585 TTTGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAA 79644 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 371774 CATCCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAA 371833 Query 79645 GTCTGGACTCAAGACAGGTATGTACTACTTG 79675 || || || ||||| || || || ||| Sbjct 371834 AAAAGGTCTAAAAACAGGCATTTATTATTTG 371864 >seq4 Length=1006061 Score = 105 bits (116), Expect = 9e-18 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 768246 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 768187 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 768186 TTTACTCGATTAATTAACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCC 768127 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 768126 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 768067 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 768066 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 768007 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 768006 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 767951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960