Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001307845.1_202015-10- 07] 34 sequences; 9,136,308 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq12 271 3e-67 seq1 181 4e-40 seq7 156 2e-32 seq4 150 7e-31 seq9 145 3e-29 seq11 111 6e-19 seq15 87.8 7e-12 seq3 87.8 7e-12 >seq12 Length=161282 Score = 271 bits (300), Expect = 3e-67 Identities = 496/715 (69%), Gaps = 16/715 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 146997 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 147056 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 147057 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 147116 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | |||| | || Sbjct 147117 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAA 147174 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 147175 AACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 147234 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 147235 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCA-ATCAT 147293 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 147294 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 147353 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| |||| | ||| ||| |||| || || | ||| |||| Sbjct 147354 T-TTACAAAAGATGAAGGAAATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAATGCT 147411 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| Sbjct 147412 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGT 147471 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 147472 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 147531 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 147532 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 147588 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 147589 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 147648 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||| |||||||||||| | || ||||||||| ||||||| | | ||||||| Sbjct 147649 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAAT 147703 >seq1 Length=1279005 Score = 181 bits (200), Expect = 4e-40 Identities = 458/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 85963 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 86022 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 86023 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 86082 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 86083 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 86140 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | || | || | | ||||| ||| | | | |||||| |||| ||||| | Sbjct 86141 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 86200 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || || | | ||||| || || ||||| Sbjct 86201 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 86260 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| |||| ||||||| ||| || Sbjct 86261 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGT-CTTGCTC 86319 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| || || ||| | ||| ||| | |||||||||||||| Sbjct 86320 AAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTACT 86379 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || ||||||| Sbjct 86380 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCT 86439 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| | || ||||||||||| || |||||||| || | || | ||| | Sbjct 86440 GGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 86499 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| || || || | |||||||||| ||||| ||||| || ||| Sbjct 86500 G-------ATAAGAA--AGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 86550 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 86551 TTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACAAGTGGT 86610 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 86611 GATACCCATTTGGGAGGTGAGGATTTCGAT 86640 Score = 116 bits (128), Expect = 1e-20 Identities = 350/536 (65%), Gaps = 27/536 (5%) Strand=Plus/Plus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT---- 451950 ||||| || || | ||||| |||||||| || || ||||| ||||||| || | Sbjct 86932 GATGAGATCGTTTTGGTAGGTGGTTCTACTCGTATCCCTAAGATTCAAGCCTTGATCAAG 86991 Query 451951 GTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAAT---CCTGATGAAGCTGT 452007 | ||||| || ||||| | | | || || | || | || |||||||| || Sbjct 86992 GAGTTCTT----TGATGGAAAGGAGCCA---AACAGAGGAATTAACCCAGATGAAGCCGT 87044 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGG 452067 || ||||||||||| || ||||| | ||| || ||||| || || | | | Sbjct 87045 CGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAAG--GAGGTA-------G 87095 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || ||| || || | || |||| || | ||||||| | Sbjct 87096 TGATTTATTATTATTGGATGTTACTCCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGT 87155 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 ||||| || | ||| || ||| | |||| || ||||| ||| || || Sbjct 87156 TATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAGAAGAGCCAAGTTTTCAG 87215 Query 452188 TAC--AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| | ||| ||||| || |||| |||| ||| || || | ||| || || ||| || Sbjct 87216 TACTTACCAA--GATAATCAGCCAGCTGTACTTATCCAGGTTTATGAGGGTGAGCGTCCA 87273 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 ||||| ||||| || || ||| |||| ||||| || || || ||| Sbjct 87274 ATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCA 87333 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || ||| |||||||| |||| | ||| ||||| | |||||||| | | || Sbjct 87334 AGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGATGGTATTTTACAAGTT 87393 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 |||||| || || |||| ||||| || || ||||| || || |||||||| Sbjct 87394 AGTGCAAAGGATAAGGGTACTGGTAAATCCGAGAAGATTACTATCACAAATGATAA 87449 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 550241 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 550182 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 550181 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 550122 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 550121 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 550062 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||| ||||| ||||| Sbjct 550061 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTGAGACTTAGAGG 550018 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 896998 TTCCAAATCTGCCACTTCTTCCAATTCGATGAATATATAATTCTTTATTAATAGGTAGAT 896939 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 896938 CGTAGTTTACAACTAAATTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 896879 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 896878 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 896829 >seq7 Length=900255 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 544399 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 544458 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 544459 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 544518 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 544519 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 544578 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 544579 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 544622 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 543943 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 544002 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 544003 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 544062 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 544063 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 544122 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 544123 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 544166 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 544171 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 544230 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 544231 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 544290 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 544291 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 544350 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 544351 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 544394 >seq4 Length=1000321 Score = 150 bits (166), Expect = 7e-31 Identities = 231/329 (70%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 757995 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 757936 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 757935 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 757876 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 757875 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCATACGGAAT- 757817 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 757816 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 757765 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 757764 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 757705 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| |||||||| ||||| |||| Sbjct 757704 AACACTTCCCTAGGAGGAGAAGACTTTGA 757676 Score = 95.1 bits (104), Expect = 5e-14 Identities = 269/409 (66%), Gaps = 22/409 (5%) Strand=Plus/Minus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 757281 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 757224 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 757223 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 757174 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 ||||||| |||||| | | ||| |||||||| || || | || || | Sbjct 757173 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 757114 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || || || ||| | || || || || || Sbjct 757113 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTA---AA 757057 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | |||||||| || ||| ||||| | | Sbjct 757056 GTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATG 756997 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | || ||||||| || || || ||||||||||||| | |||| |||| ||| Sbjct 756996 ATGGGAA--TTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 756939 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| ||||| |||| || ||| ||||||| Sbjct 756938 ATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTCAACTGGAAA 756890 >seq9 Length=425574 Score = 145 bits (160), Expect = 3e-29 Identities = 300/443 (68%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 215949 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 216006 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 216007 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 216065 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | | || || ||||| || Sbjct 216066 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCTCA 216125 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| | |||||||| || |||||||| ||| | Sbjct 216126 AAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAG 216185 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 216186 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 216242 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 216243 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 216302 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || |||| |||| || ||||| |||||||| |||||||| Sbjct 216303 TGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAATGG 216362 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 216363 TACTGATGGAATTGGTACAGGTT 216385 Score = 138 bits (152), Expect = 4e-27 Identities = 401/596 (67%), Gaps = 40/596 (7%) Strand=Plus/Plus Query 363744 GGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGGA 363803 ||||| || ||||| |||||||| || |||| || | || | | |||||| Sbjct 215140 GGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCCAAAAAATGTACT 215199 Query 363804 -TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAAG 363859 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 215200 CTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTAT 215255 Query 363860 TAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAGA 363919 | | |||| | | || ||| | ||||| || || ||| | |||||||| ||||| Sbjct 215256 TGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAGA 215315 Query 363920 AGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAGG 363979 ||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || || Sbjct 215316 AGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGGG 215375 Query 363980 ATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAAA 364039 |||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 215376 ATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTTC 215429 Query 364040 AGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAAA 364099 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | || Sbjct 215430 TTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTAA 215489 Query 364100 TATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTAT 364156 | | | || || ||| ||||| | | | || | ||| | || ||| |||| | | Sbjct 215490 TTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TTT 215547 Query 364157 GAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATTT 364213 | | ||||| ||||||||||| | ||||||| || ||||| | ||| | || ||| Sbjct 215548 GTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATTT---CATTCTTTACTTT 215603 Query 364214 AACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT-A 364266 | ||| ||||| | |||||||| ||||| || ||| |||| | ||| | Sbjct 215604 ATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTCA 215662 Query 364267 AATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATAtttt 364319 | ||||| ||||| ||||| |||||| || ||| ||| ||||||||||||| Sbjct 215663 AGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAATATTTT 215715 Score = 104 bits (114), Expect = 9e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 58811 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 58752 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 58751 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 58692 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | ||| |||| || || ||||| || Sbjct 58691 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGAAATATACCTCCTTCATATGG 58632 Query 96292 TGTTCC 96297 |||||| Sbjct 58631 TGTTCC 58626 >seq11 Length=171546 Score = 111 bits (122), Expect = 6e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 45191 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 45250 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 45251 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 45310 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 45311 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 45364 >seq15 Length=90691 Score = 87.8 bits (96), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 76629 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 76573 Query 420766 CGTAAGAA-TCTTCTA------CCACAATCATCATATTTAGATAATCCAGTAAATACAAC 420818 | ||||| | ||||| | | ||||| | |||| ||| | ||||||||||| Sbjct 76572 -GAAAGAAGTATTCTATTTTTTCTTCCATCATACTTTTTA-ATA--CTAGTAAATACAAT 76517 Query 420819 AGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAAT 420878 || | | | || ||| | || | ||| | || |||||||| || || ||||| || Sbjct 76516 AGATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGAT 76457 Query 420879 TAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATG 420938 |||| | | | | | | || ||| |||||||| | ||| |||| || ||| ||| Sbjct 76456 TAATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATG 76397 Query 420939 ATGA 420942 |||| Sbjct 76396 ATGA 76393 >seq3 Length=1168330 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| || || ||| ||| || Sbjct 478965 ATCAAGGCCTCTTCTTCCTGCTCTACCACTCATTTGAATGAACTCTCCAG-AGTTAACAA 479023 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 479024 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 479083 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 479084 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 479143 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 479144 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 479193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717539327672