Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001307845.1_202015-10- 07] 34 sequences; 9,136,308 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 352 2e-91 seq4 262 3e-64 seq1 242 2e-58 seq10 150 1e-30 seq9 141 6e-28 seq7 120 2e-21 seq2 105 4e-17 >seq12 Length=161282 Score = 352 bits (390), Expect = 2e-91 Identities = 669/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 147592 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 147651 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| || || ||||| Sbjct 147652 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTA 147711 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATC---TGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | || ||| || ||||| ||| |||||| Sbjct 147712 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGA 147771 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 147772 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 147831 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | ||| || ||||||||| | || | || || | | Sbjct 147832 ATTGAGTTAGATTCACTCTATGAGGGTATTGATTATTCAGTTGCCATCAGTAGAGCCAGA 147891 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 147892 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 147951 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 147952 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 148011 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 148012 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 148069 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 148070 AAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 148129 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 148130 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 148180 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 148181 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 148240 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 148241 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGT 148299 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 148300 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 148359 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| ||| Sbjct 148360 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACT 148419 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| ||||||| | | ||| Sbjct 148420 TTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTGGTAAG 148479 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 148480 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 148539 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 148540 ATGGTTAATGATGC 148553 Score = 280 bits (310), Expect = 1e-69 Identities = 394/551 (72%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 146998 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 147057 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | |||||| Sbjct 147058 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACT 147117 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| ||||| | || Sbjct 147118 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAAC 147177 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 147178 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 147237 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | ||| ||| || Sbjct 147238 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAGT 147297 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 147298 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 147357 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||| | | |||| | || | || | | |||| ||| || Sbjct 147358 CAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTGTAGTT 147417 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || |||||||||||||| || ||||| || |||| Sbjct 147418 ACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTGCAATT 147477 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 147478 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 147537 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 147538 CTTGATAAGAA 147548 >seq4 Length=1000321 Score = 262 bits (290), Expect = 3e-64 Identities = 687/1029 (67%), Gaps = 63/1029 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 853133 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 853192 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 853193 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 853244 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || ||||| || |||| |||| ||| || Sbjct 853245 CTAATGGTAGATTTACTGAACCTGTTAGTGATTTAAAAGGAATATGGTTTAAAGATTCTG 853304 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 853305 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 853361 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 853362 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 853420 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 853421 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 853474 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 853475 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 853532 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 853533 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 853592 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAG--- 297217 || ||| || ||| | | || | ||||||||| |||||||||||||| Sbjct 853593 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 853652 Query 297218 --------AATTTTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCA 297269 ||||| | || ||| | ||||||||| ||||| | || |||||| | Sbjct 853653 TAGCATCAAATTTAAAAGA--TGAAGAAATTAATGATATACATCGTCATTTTATTGATTA 853710 Query 297270 AATAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGT 297323 || |||||||| || | |||||| | || ||| | || | || Sbjct 853711 TATTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGT 853770 Query 297324 TTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGA 297383 ||| ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| Sbjct 853771 TTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCTATTAATTATCCATTTGA 853830 Query 297384 AAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAAT 297443 |||| ||| | || | | | | ||| | |||||||||| | ||| | Sbjct 853831 AAATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTT 853884 Query 297444 TGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAA 297503 |||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | | Sbjct 853885 AGATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCA 853944 Query 297504 ACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAAT 297563 |||||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||| Sbjct 853945 ACCAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAAT 854004 Query 297564 GTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGC 297620 ||||||||| |||| ||||||||||||||| | || ||| | ||||||||||||| Sbjct 854005 GTCAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGC 854061 Query 297621 AGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAA 297678 |||| ||||| | |||||| | || || |||| || |||| ||| ||| | | | | Sbjct 854062 AGATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGA 854119 Query 297679 TTTGATGAA 297687 ||| | ||| Sbjct 854120 TTTAAAGAA 854128 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 852302 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 852359 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 852360 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 852419 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 852420 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 852472 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 852473 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 852532 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 852533 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 852592 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 |||||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 852593 ATTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 852652 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| || | | ||| | || ||||| ||| ||||| ||| Sbjct 852653 GTATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 852712 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 852713 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 852772 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 852773 AATGATCCATCTGT 852786 Score = 152 bits (168), Expect = 3e-31 Identities = 276/398 (69%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 757281 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 757224 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 757223 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 757174 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATG 475968 ||||||| | || || || | ||| | ||| |||||||||| | || |||| Sbjct 757173 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 757114 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 |||| | | || ||||| |||||| | | || |||||||| || || || | Sbjct 757113 AAAAAGAGCCAA-GTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGT 757055 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTT 476086 || |||| |||||| |||| || |||||||| |||||| ||| ||| | Sbjct 757054 TTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGAT 756995 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| || |||||||| ||||||||||||||||| || |||||||||||| Sbjct 756994 G--GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGAT 756937 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||| ||| | |||||| ||| |||||| || Sbjct 756936 GCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 756899 Score = 123 bits (136), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 758003 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 757945 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 757944 GTTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 757885 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| Sbjct 757884 TCTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCA 757825 Query 474860 TATGG 474864 || || Sbjct 757824 TACGG 757820 >seq1 Length=1279005 Score = 242 bits (268), Expect = 2e-58 Identities = 395/559 (71%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 85963 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 86022 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 86023 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 86082 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 86083 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 86140 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 || | || || | || ||| | ||||||||| |||| | ||| |||||||| | Sbjct 86141 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 86200 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA 474629 ||| | | | || | | || | || || | | | || || || ||| ||| Sbjct 86201 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGT-- 86258 Query 474630 TACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | | ||||| | || ||||| | || ||| | |||| | ||||| || Sbjct 86259 TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGTCTTGCT 86318 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||| |||||| ||| || ||| | ||||| || | ||||||| |||||||||||| Sbjct 86319 CAAGATGAAAGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTA 86377 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| || ||||||||| |||| ||||| || || || ||||| || |||| Sbjct 86378 CTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTG 86437 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| |||| Sbjct 86438 CTGGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTT 86497 Query 474867 TTGATAAGAATTCTGACAA 474885 | |||||||| |||| || Sbjct 86498 TGGATAAGAAAGCTGAGAA 86516 Score = 140 bits (154), Expect = 2e-27 Identities = 260/380 (68%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 87028 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 87087 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || | | | || ||||| | |||| ||||| | | |||||| || Sbjct 87088 GGAGGT-AGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTATT 87138 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||| Sbjct 87139 GAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAG 87198 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || |||| || ||||| |||||||| || ||||| ||||| | | | Sbjct 87199 AAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTTAT 87258 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || ||||| | | | ||||| ||||| ||| || |||| || | ||| || Sbjct 87259 GAGGGTGAGCGTCCAATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGA 87318 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | || Sbjct 87319 ATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGAT 87378 Query 476153 GGTATTCTTAATGTTACTGC 476172 |||||| | | |||| ||| Sbjct 87379 GGTATTTTACAAGTTAGTGC 87398 Score = 132 bits (146), Expect = 3e-25 Identities = 280/404 (69%), Gaps = 24/404 (6%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 835175 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 835233 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 835234 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 835292 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 835293 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 835350 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || ||||| || | | | Sbjct 835351 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCGCCCTCCAAT 835405 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | |||||||||||| || || ||||| |||||||| Sbjct 835406 CCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGCCAATTGTCATACGC 835465 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 835466 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 835525 Query 269464 ATATCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 ||||| ||| | || || ||| | || | |||||| ||||| Sbjct 835526 ATATC--CTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTG 835566 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 550062 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 550121 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 550122 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 550181 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 550182 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 550238 >seq10 Length=152230 Score = 150 bits (166), Expect = 1e-30 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| Sbjct 139941 TAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTAAGATCTACAA 140000 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | | |||||| ||||| || |||| ||||||| |||| | | Sbjct 140001 TCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 140060 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||||| |||| |||||||| || |||||||||||| | |||| ||| Sbjct 140061 ATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 140106 >seq9 Length=425574 Score = 141 bits (156), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || |||||| || Sbjct 216383 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 216324 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 216323 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 216266 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||||||| Sbjct 216265 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 216206 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 | |||||| || || | ||| |||||||||||||| || ||| | ||||| Sbjct 216205 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 216149 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACTGT 355542 || |||||||||||| ||||||| ||||| || | ||||| | || | ||| | Sbjct 216148 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGT-AATGATGAT 216090 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 |||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 216089 TCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA-- 216032 Query 355603 TCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTA 355662 ||| |||| || || || || || | | |||||||||||| ||||| Sbjct 216031 -GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTT 215973 Query 355663 AGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAA 355720 | ||| || || || || || ||||| || |||| ||| ||| |||| | | || Sbjct 215972 AAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAA 215915 Query 355721 GTTCGCGATGAATAAAATCATAATAT 355746 |||| ||||||||||||| ||||| Sbjct 215914 GTTCTTTATGAATAAAATCAAAATAT 215889 >seq7 Length=900255 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 544597 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 544540 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 544539 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 544480 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 544479 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 544420 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 544419 AGTCTTAACGAAAATCTG 544402 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 544141 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 544084 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 544083 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 544024 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 544023 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 543964 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 543963 AGTCTTAACAAAAATCTG 543946 Score = 105 bits (116), Expect = 4e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 544349 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 544290 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 544289 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 544230 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | |||||| || ||||| || Sbjct 544229 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGACAAAAATCTG 544174 >seq2 Length=1244090 Score = 105 bits (116), Expect = 4e-17 Identities = 327/501 (65%), Gaps = 24/501 (5%) Strand=Plus/Minus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATTAATAAC-AG 894904 |||| |||| |||||||| || ||||| |||||||| ||| ||||| || | Sbjct 622435 TTATGATGGATTTGAACCTTCAGGAAGAATGCATATTGCTCAATGTATATTAAAGACTAT 622376 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | || | || | || |||| Sbjct 622375 TAATGTAAATAAGTTAACTGAAT----GTGGATGCGTTTTTGTATTCTACGTAGCAGATT 622320 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| ||||||||| ||||| || ||| ||| Sbjct 622319 GGTTTGCTCTACTCAATAATAAGATGGGCGGTGATCTTGAAAAAATCAAGATTGTTGGTG 622260 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 ||||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 622259 AATATTTCGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 622200 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || |||| Sbjct 622199 GGGCATCTGATTTTATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATA 622140 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 622139 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 622082 Query 895200 AGACGGAGATGAATTATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATAT 895259 ||| |||||| | | | || | | ||||||| ||||||||| || ||||| Sbjct 622081 AGAAAATGATGAACAACCATGTGCTTCAGTATTTTATCCATGCATGCAATGCGCTGATAT 622022 Query 895260 TTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGT 895319 || ||||| |||| ||||||||| || |||||| | |||||| | ||||| Sbjct 622021 ATTCCAACTC-------AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGT 621971 Query 895320 TAATATGCTCGCTCTCGAATA 895340 ||| ||||| ||| ||||| Sbjct 621970 TAACATGCTTGCTAGAGAATA 621950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177741575032